Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq17968 107 4e-18 seq10015 96.9 7e-15 >seq17968 Length=506 Score = 107 bits (118), Expect = 4e-18 Identities = 73/81 (90%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 294860 ATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 ||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 175 ATGGTGCCGGCACCAGGAATCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCTAC 233 Query 294920 CAGCTGAGCTATAACGGCAAT 294940 ||||||||||||| ||||||| Sbjct 234 CAGCTGAGCTATACCGGCAAT 254 >seq10015 Length=7542 Score = 96.9 bits (106), Expect = 7e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 294860 ATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 ||||||||| || | |||||||||| || |||||||||||||||||||||||||||||| Sbjct 2094 ATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCTCTAC 2152 Query 294920 CAGCTGAGCTATAACGGC 294937 || ||||||||| |||| Sbjct 2153 CAACTGAGCTATGCCGGC 2170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988945086711089