Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq17400 129 5e-25 >seq17400 Length=8471 Score = 129 bits (142), Expect = 5e-25 Identities = 296/437 (68%), Gaps = 9/437 (2%) Strand=Plus/Plus Query 125926 ATACCGCAATAGGTGCTTTAATAGCAGGGTGTGATTCATAATTTATCAATTCTAAATCTT 125985 |||| || | ||||| || || ||||| || || | ||||||||| | || | ||||| Sbjct 3921 ATACAGCCACCGGTGCCTTGATTGCAGGATGCGAGTGATAATTTATAATGTCAATATCTT 3980 Query 125986 CATAATTAATATCAAAAATTGATTTA---TCTGTATTAATTTTTAATTGAGGTGGTAGAT 126042 || | |||| |||||||| ||| |||| ||| | |||||| ||| || | Sbjct 3981 CAAATTTAAAGTCAAAAATACTTTTTACTTCTGGATTCAGTTTTAACTGACACAGTTC-T 4039 Query 126043 AACT-ATCTCTTGATAATTGTG-TATGTATTGCATCCATATGATTGGAATAAATATGTGC 126100 | | ||| | | ||| | || |||| || | ||| |||| ||| | |||| Sbjct 4040 AGCGGATCACGGCCCAGCTGTAATCTGGCTTGC-TCAAAATGGTTGGCATACAGGTGTGT 4098 Query 126101 ATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATG 126160 ||| || || | || ||||| || | ||| |||| ||| |||| | ||| Sbjct 4099 ATCACCCCCGGTCCAGACAAAATCACCAACTTGAAGGTCACAGACTTGAGCAATCATATG 4158 Query 126161 TGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCT 126220 || || | |||||||| ||||||||||| || ||||| | |||| ||| ||||| | Sbjct 4159 AGTGAGCAGGGCATAACTCGCAATATTGAAGGGTACACCCAGGAATACATCGGCACTGCG 4218 Query 126221 TTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCA 126280 || || | || ||| ||||| || | |||||| |||| ||||||| || ||||| Sbjct 4219 CTGGTAAAGCTGGCAAGACAATTTGCCATTTTGTACAAAAAACTGAAACAGGGTATGGCA 4278 Query 126281 AGGTGGTAATGCCA-TTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTC 126339 |||||| ||||| | || | | ||| |||||||||| | ||||| ||| | || | Sbjct 4279 AGGTGGCAATGCAACCTGGCT-GGCTTCTTTAGGATTCCAGCCAGAAACGATGAGCCGGC 4337 Query 126340 GAGAGTTTGGATTGGTT 126356 | || || ||||||||| Sbjct 4338 GTGAATTCGGATTGGTT 4354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408445455617591