Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq17400 129 5e-25
>seq17400
Length=8471
Score = 129 bits (142), Expect = 5e-25
Identities = 296/437 (68%), Gaps = 9/437 (2%)
Strand=Plus/Plus
Query 125926 ATACCGCAATAGGTGCTTTAATAGCAGGGTGTGATTCATAATTTATCAATTCTAAATCTT 125985
|||| || | ||||| || || ||||| || || | ||||||||| | || | |||||
Sbjct 3921 ATACAGCCACCGGTGCCTTGATTGCAGGATGCGAGTGATAATTTATAATGTCAATATCTT 3980
Query 125986 CATAATTAATATCAAAAATTGATTTA---TCTGTATTAATTTTTAATTGAGGTGGTAGAT 126042
|| | |||| |||||||| ||| |||| ||| | |||||| ||| || |
Sbjct 3981 CAAATTTAAAGTCAAAAATACTTTTTACTTCTGGATTCAGTTTTAACTGACACAGTTC-T 4039
Query 126043 AACT-ATCTCTTGATAATTGTG-TATGTATTGCATCCATATGATTGGAATAAATATGTGC 126100
| | ||| | | ||| | || |||| || | ||| |||| ||| | ||||
Sbjct 4040 AGCGGATCACGGCCCAGCTGTAATCTGGCTTGC-TCAAAATGGTTGGCATACAGGTGTGT 4098
Query 126101 ATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATG 126160
||| || || | || ||||| || | ||| |||| ||| |||| | |||
Sbjct 4099 ATCACCCCCGGTCCAGACAAAATCACCAACTTGAAGGTCACAGACTTGAGCAATCATATG 4158
Query 126161 TGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCT 126220
|| || | |||||||| ||||||||||| || ||||| | |||| ||| ||||| |
Sbjct 4159 AGTGAGCAGGGCATAACTCGCAATATTGAAGGGTACACCCAGGAATACATCGGCACTGCG 4218
Query 126221 TTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCA 126280
|| || | || ||| ||||| || | |||||| |||| ||||||| || |||||
Sbjct 4219 CTGGTAAAGCTGGCAAGACAATTTGCCATTTTGTACAAAAAACTGAAACAGGGTATGGCA 4278
Query 126281 AGGTGGTAATGCCA-TTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTC 126339
|||||| ||||| | || | | ||| |||||||||| | ||||| ||| | || |
Sbjct 4279 AGGTGGCAATGCAACCTGGCT-GGCTTCTTTAGGATTCCAGCCAGAAACGATGAGCCGGC 4337
Query 126340 GAGAGTTTGGATTGGTT 126356
| || || |||||||||
Sbjct 4338 GTGAATTCGGATTGGTT 4354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408445455617591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |