Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq17408 159 3e-34 >seq17408 Length=748846 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| || | ||| Sbjct 535778 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 535837 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || | || || ||||||||||||||||| || ||| | ||||| || ||| Sbjct 535838 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAAAACTGG 535897 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| ||||||||| || || ||||| ||||||||||| Sbjct 535898 CAAAGGGCGTGGCACGGAGGTAGGGCCATGAGAGGGAGATC 535938 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||||||||| ||||| || || ||||||||| |||| ||||| || ||||| | ||| Sbjct 535938 GATCTCCCTCTCATGGCCCTACCTCCGTGCCACGCCCTTTGCCAGTTTTACGTGGTGAAC 535879 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || ||||||||||| | || ||||| ||| Sbjct 535878 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTC 535819 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 535818 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 535778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448090306461360