Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_030940.1
Length=32637
Score E
Sequences producing significant alignments: (Bits) Value
seq13800 194 4e-45
seq17834 147 5e-31
seq8615 95.1 3e-15
seq18487 93.3 9e-15
>seq13800
Length=12474
Score = 194 bits (214), Expect = 4e-45
Identities = 115/120 (96%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 2850 CTGGGGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTT 2909
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 8287 CTGAGGGCCTATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTT 8346
Query 2910 CGAGTCCGTGTGGGCCCACCACCTTCAAAGCCGCGCACTGCGCGGCTTTCGCCTTTCTGG 2969
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 8347 CGAGTCCGTGTGGGCCCACCATATTCAAAGCCGCGCACTGCGCGGCTTTCGGCTTTCTGG 8406
>seq17834
Length=378
Score = 147 bits (162), Expect = 5e-31
Identities = 105/121 (87%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 2850 CTGGGGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTT 2909
||| |||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||
Sbjct 156 CTGAGGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTT 97
Query 2910 CGAGTCCGTGTGGGCCCACCACCTTCAAAGCCGCGCACTGCGCGGCTTTCGCCTTTCTGG 2969
||||||| |||||||||||| ||||||||||||| ||||||||||| || | |||||
Sbjct 96 CGAGTCCTACTGGGCCCACCACACTCAAAGCCGCGCATTGCGCGGCTTTTGCGTATCTGG 37
Query 2970 C 2970
|
Sbjct 36 C 36
>seq8615
Length=1762
Score = 95.1 bits (104), Expect = 3e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913
|||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| ||
Sbjct 371 GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAG 430
Query 2914 TCCGTGTGGGCCCACCA 2930
|| ||||||||||||
Sbjct 431 TCACGGTGGGCCCACCA 447
>seq18487
Length=4867
Score = 93.3 bits (102), Expect = 9e-15
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 9264 CCGTACCGCCGAAAAGTTCGTAGTGCGCCTACCTGACGGCATGCGCGATCGGGTCGCGGA 9323
||| || || || |||||||| || ||||| || ||||| ||||| || || |||| ||
Sbjct 4480 CCGCACTGCTGACAAGTTCGTCGTTCGCCTGCCAGACGGGATGCGTGAGCGCATCGCCGA 4539
Query 9324 GACTGCGCGGGACAACCATCGCAGCATGAATTCGGAGATCATCGCCCGCTTGGAACAGA 9382
| || || || |||| ||||||||||| ||||||||||| || ||| |||| ||||
Sbjct 4540 GGTAGCACGCAACCACCACCGCAGCATGAACTCGGAGATCATTGCACGCCTGGAGCAGA 4598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104278753902694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |