Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq4096 87.8 2e-12 seq9311 82.4 8e-11 >seq4096 Length=1707 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||| | || ||||||||||||||||||||| | ||||||||||| | ||||||| Sbjct 1587 AAATGGCGCGCCTGACAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTA 1528 Query 66460 TCCAGCTGAGCTA 66472 |||| |||||||| Sbjct 1527 TCCAACTGAGCTA 1515 >seq9311 Length=16340 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 || |||| ||||| ||||| ||||||||| |||| | ||||||||||| | ||||||| Sbjct 3985 AAGTGGCGCACCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTA 3926 Query 66460 TCCAGCTGAGCTA 66472 ||||||||||||| Sbjct 3925 TCCAGCTGAGCTA 3913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521914753448280