Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031021.1
Length=41224
Score E
Sequences producing significant alignments: (Bits) Value
seq698 661 0.0
>seq698
Length=3433
Score = 661 bits (732), Expect = 0.0
Identities = 775/1043 (74%), Gaps = 6/1043 (1%)
Strand=Plus/Plus
Query 39229 ACGCCAGTTACCAGGAACGCAATTGGCACATGCTTACGGTCGACTACACGGTTCCAGTTG 39288
|| ||||| |||||||| || || || | ||||| || || | || ||||||||||||
Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250
Query 39289 GCGGCGTTAGCCAGGTCCTGCCAGCTAGCGGAGCGGGCGGTAGTCTCGGTGCCGTTGCCG 39348
| ||| ||||| ||||||||| || ||||| | || ||||||||||||||||||
Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCGTGGTCTCGGTGCCGTTGCCG 310
Query 39349 GTGATTACAGCGCTGGTGAAGCTGTAACCAAACGGATGCAGCAACCACGTTTTACGAGTC 39408
||||| || ||| ||||| || | ||| ||||||| ||| || || || ||
Sbjct 311 GTGATGGTGGCCGACAGGAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCTC 370
Query 39409 CACAGGGTTTCAACACCACCACCATTAGCACGAGATGCTTCACGTTCGTATTCCAGCGGC 39468
||||| |||||| || ||||| ||| | |||| ||| || ||||| | ||
Sbjct 371 CACAGCACTTCAACGCCGCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGGA 430
Query 39469 ATCTCAGGATTGCCTTCGCCGTAACCGATAGCACCCTGGCCGAAGATGATGGAGATGAAT 39528
|||||| |||||| |||||||||||||||||||| || ||||| | | ||||||
Sbjct 431 TGCTCAGGGGAGCCTTCACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAAC 490
Query 39529 TTACGGCTAGTGTCCTGA-CCAACTACGGTCATGCTGTCATCGACGATGACGCGGTAACC 39587
|| || | || || | || | |||||||| |||||||| | | |||||| ||
Sbjct 491 TTGCG-CGAGCTGCCGGTGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGCC 549
Query 39588 CTGGTAGGTGGCGAACATGGTGTTGTTCTCAGCATCACGGATGAAGTCGATAAGCTGGGC 39647
||||||||| |||| | ||||||||| ||||| ||||||||||||||||| | |||
Sbjct 550 CTGGTAGGTCGCGATCTGGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCTT 609
Query 39648 TTTACGGGCCTGT--GCGTATACGAAGCTGTGCATTGCGATAGCACCGAGAACCTCACCG 39705
|||| || ||| | || |||||||| |||| || || | ||||| |||| |||
Sbjct 610 CTTAC--GCATGTCGCCATACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCCG 667
Query 39706 CCGTTGCCCATCAATGCATCACCCATAGTCTGGGTAGCATCGATGAATGCACCTGCGTCG 39765
|| | |||||||| ||||||||||| |||||||| || |||||||| || || || |||
Sbjct 668 CCAGTCCCCATCAACGCATCACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATCG 727
Query 39766 AAGCCTGAAGTTGCAGAAACGTCAACAACCATGTCGTTCTGCTCGTGATACGCATCAGTA 39825
|| || || || |||||||| | |||||||||||||| || ||||||||||
Sbjct 728 AAACCGCCAGCAGCGGAAACGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGTT 787
Query 39826 GCGGATACGTTGTCGTTGTACAGGCCGAGTGCAGTTGCAATAAGGCGACGCTGCGCCTGA 39885
||| | |||||||||||| | || || | || || | || || ||||| |||||
Sbjct 788 GCGCCGATGTTGTCGTTGTAGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTGG 847
Query 39886 CGCTGCCAGAAGTTATCCAGACGGGATGCGACGGACTGCAACGGATTCTGGCTGGTAAGT 39945
|||||||||||||| ||||| || | || ||||| |||| ||| |||| |||||| ||
Sbjct 848 CGCTGCCAGAAGTTGTCCAGGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAGC 907
Query 39946 TCTACAGTCAGGTCTGCCTGGCCGAAACCTTCGTTCAGATATGCAACGCGGGCCATCATT 40005
|| ||||||||||| |||||||| ||||||||||| || || ||||| ||||||| |||
Sbjct 908 TCGACAGTCAGGTCGGCCTGGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCATA 967
Query 40006 TCACCGGTCTGAATAGCGCGCGGGGTCGCGATGTCCTGGTATACGTCATTCGAGTAGTTA 40065
|| ||||| | ||| |||||| || | ||| ||| || || |||||||||||
Sbjct 968 TCGCCGGTTTCAATGTTGCGCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTTC 1027
Query 40066 GGCTCGATAGAAGTATCGATAGCTTTCCAGAACGGCAGGTTAGCGATGTTAGACGGTCCG 40125
||||||| || | ||||| | |||||| |||| | ||| |||||||| ||||| |||
Sbjct 1028 GGCTCGACGGATGCGTCGATCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCCG 1087
Query 40126 CGGGCAATCTCGGCAGCATACGGAGTTGGGGTCAAAATTCCGGAGTTGAAAAACGCGGTT 40185
|| || ||||| ||||| ||||| |||||||| | ||| ||||| | ||| ||||||||
Sbjct 1088 CGTGCGATCTCAGCAGCGTACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGTC 1147
Query 40186 TTCTCTACCGGGTCTTCCGTCATATAGGACGCCAGTACAGGGATATTGCCAGTTACGATG 40245
|| || |||||||||| |||| || || | ||| || ||||| || || || | |||
Sbjct 1148 TTTTCAACCGGGTCTTGGGTCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGATA 1207
Query 40246 TTACCAATAGTGGTGATTGCCAT 40268
||||| || |||||||| | |||
Sbjct 1208 TTACCGATCGTGGTGATAGGCAT 1230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131747132066516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |