Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031048.1
Length=41918
Score E
Sequences producing significant alignments: (Bits) Value
seq7504 105 2e-18
seq12372 95.1 3e-15
>seq7504
Length=9783
Score = 105 bits (116), Expect = 2e-18
Identities = 206/297 (69%), Gaps = 17/297 (6%)
Strand=Plus/Minus
Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967
||| || ||| | ||| ||||||||||||||||||||| | ||| | | || |||
Sbjct 3118 GCCGTTGATGTCAACGATGATTTCAGTGGTGTAGCGCTTGATGCCGTCTTTTTC---CCA 3062
Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAA-CACCTTGCTG-CCTTTGCGCAGGTATTCA 27025
| |||||| |||| |||||| ||| | ||| ||| |||||||||||||| ||
Sbjct 3061 CTCACGGGTCTGCAGCTTGCCTTCGATGTAGCAC--TGCGAACCTTTGCGCAGGTACTCG 3004
Query 27026 CCAGCGATTTCCGCCAGCTTGCCGAAGAT-GACAACGCGGTGCCATTCCGTCTGCT---- 27080
|| || || || || | ||||||||| | |||| | ||||||||||| || |||
Sbjct 3003 CCGGCAATCTCAGCAACCTTGCCGAACAGCGACA-CACGGTGCCATTCGGTACGCTCGAC 2945
Query 27081 CTTTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGG 27140
||| ||| || ||| ||| || |||| | ||| | || || | ||| || ||||
Sbjct 2944 CTTCTGGCCCGACTG----CTTGTCGGTCCATTGCTCGCTGGTTGCCAGGCTCAGGTTGG 2889
Query 27141 CAACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197
|| || ||| |||| |||||| ||||| ||||| | ||| | ||||||
Sbjct 2888 TCACGGCATTACCGTTGGGCAGGTAGCGGACTTCGGGATCCTGGCCACAGGTACCGA 2832
>seq12372
Length=38393
Score = 95.1 bits (104), Expect = 3e-15
Identities = 190/278 (68%), Gaps = 13/278 (5%)
Strand=Plus/Minus
Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967
||| || ||| | || |||||||||||||||| |||| | ||| | || || |||
Sbjct 38303 GCCGTTGATGTCGACAATGATTTCAGTGGTGTAACGCTTGATGCCGTCCTTCTC---CCA 38247
Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACC 27027
| |||||| |||| |||||| ||| | | | |||||||||||||| || ||
Sbjct 38246 CTCGCGGGTTTGCAGCTTGCCTTCGATGTAGCATTGGGAACCTTTGCGCAGGTACTCGCC 38187
Query 27028 AGCGATTTCCGCCAGCTTGCCGAAGAT-GACAACGCGGTGCCATTCCGTCTGCT----CT 27082
||||| || |||| ||||||||| | |||| |||||||||| || || ||| ||
Sbjct 38186 GGCGATCTCGGCCACCTTGCCGAACAACGACA-CGCGGTGCCACTCGGTGCGCTCGACCT 38128
Query 27083 TTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCA 27142
| || || || ||| || |||||| ||| | ||||| | |||||| || |
Sbjct 38127 TCTG----CCCGGTTTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTAGTT 38072
Query 27143 ACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATC 27180
|| ||| || |||| ||| || ||||| || ||
Sbjct 38071 ACCGCGTTGCCGTTTGGCAGGTAACGGACTTCGGGGTC 38034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133967122103280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |