Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq30298 84.2 2e-11 >seq30298 Length=5331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 120444 CCAAGCCCAA-GCCGTGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTC 120502 ||||| ||| | ||| || ||| ||||| ||||| || || | | ||| |||||||| Sbjct 2054 CCAAGAACAACGGCGTACCGGTG-GGGCCTGGCCGAGGCTCGGGTGCAGGTTCGCTGGTG 2112 Query 120503 ACCTACGTCATGGGCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGC 120562 ||||||| | |||||| |||| ||| | ||||||||| ||||||||||| Sbjct 2113 GCCTACGTGCTCAAGATCACCGACCTCGACCCGCTGGCCTACGACCTGCTGTTCGAGCGC 2172 Query 120563 TTCATCAACCCGGATCGCCCCGACTTTCCCGACATCGACGTCGACTTC 120610 ||| | ||||| || || | | |||||| |||||||||||||| Sbjct 2173 TTCCTGAACCCTGAGCGGGTGTCCATGCCCGACTTCGACGTCGACTTC 2220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514826275848600