Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq28418 136 1e-27 >seq28418 Length=525 Score = 136 bits (150), Expect = 1e-27 Identities = 259/377 (69%), Gaps = 6/377 (2%) Strand=Plus/Plus Query 791 ATTTGCCGATCAATGGAAAAGCCCAATACTATTGTAGGTTTTAAGATTGGTCATGCGCTG 850 || ||||| || ||||| ||||| | || ||||| ||||| |||||||| || || ||| Sbjct 6 ATCTGCCGGTCGATGGAGAAGCCGCAGACGATTGTCGGTTTCAAGATTGGCCACGCCCTG 65 Query 851 ATTGATGAGCTTGATGTGATGACAAAGGTCAAGGCTCAACAAGCTTGGCGTAAGATCATT 910 | |||||||| || ||| |||| |||||||| || || || ||||| ||||||||| Sbjct 66 GTGGATGAGCTGGACGTGCTGACTGCCGTCAAGGCACAGCAGGCCTGGCGCAAGATCATT 125 Query 911 GCTCGTATGCGATATAAACAAGCTGGTTTGTTGAACGGTATTGATGTTGCAACAACGCCA 970 || || ||||| || || | || || |||||| | || || | || ||||| Sbjct 126 GCCCGGATGCGTTACAACTTGCCCGGGCTGAAGAACGGGGTGGACGTCACCACGACGCCG 185 Query 971 GAGGGCTTTAAGTTCACTCAT-GAGCAATTTGTCAA--AGAAGCAAACCAAAGCGAGGCT 1027 || |||||||||||| || | ||| || || || || || ||| || ||| Sbjct 186 GAAGGCTTTAAGTTC-GTCTTCCTGCAGTTCGTGAAGCAGCTGCGCGACAAGCCGTCGCT 244 Query 1028 AAGCGCGCTCTATATGGAATGATTCAAGCTTCCACCTATGATAATGAAGCCAATCTTCCT 1087 | | | | || || || | || || ||||| || || || |||||| || Sbjct 245 CAAGGAG--ATGTACGGCCTGGTGCAGGCCAGCACCTTCGACAACGAGCTCAATCTGCCG 302 Query 1088 GATGACTACATTGCATCATTGTTTGAGTCTTACCCACCTCAATTGATTTCAGCCTACTTA 1147 ||||||||||| || || || | ||||| || || ||||| ||||| || ||| | Sbjct 303 GATGACTACATCGCCTCCTTAATGGAGTCGTATCCGCCTCAGCTGATTATGGCGTACCTC 362 Query 1148 AAAGGGCAATTCGTAAA 1164 ||||| || ||||| || Sbjct 363 AAAGGCCAGTTCGTCAA 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130227686436166