Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031098.1
Length=40749
Score E
Sequences producing significant alignments: (Bits) Value
seq28418 136 1e-27
>seq28418
Length=525
Score = 136 bits (150), Expect = 1e-27
Identities = 259/377 (69%), Gaps = 6/377 (2%)
Strand=Plus/Plus
Query 791 ATTTGCCGATCAATGGAAAAGCCCAATACTATTGTAGGTTTTAAGATTGGTCATGCGCTG 850
|| ||||| || ||||| ||||| | || ||||| ||||| |||||||| || || |||
Sbjct 6 ATCTGCCGGTCGATGGAGAAGCCGCAGACGATTGTCGGTTTCAAGATTGGCCACGCCCTG 65
Query 851 ATTGATGAGCTTGATGTGATGACAAAGGTCAAGGCTCAACAAGCTTGGCGTAAGATCATT 910
| |||||||| || ||| |||| |||||||| || || || ||||| |||||||||
Sbjct 66 GTGGATGAGCTGGACGTGCTGACTGCCGTCAAGGCACAGCAGGCCTGGCGCAAGATCATT 125
Query 911 GCTCGTATGCGATATAAACAAGCTGGTTTGTTGAACGGTATTGATGTTGCAACAACGCCA 970
|| || ||||| || || | || || |||||| | || || | || |||||
Sbjct 126 GCCCGGATGCGTTACAACTTGCCCGGGCTGAAGAACGGGGTGGACGTCACCACGACGCCG 185
Query 971 GAGGGCTTTAAGTTCACTCAT-GAGCAATTTGTCAA--AGAAGCAAACCAAAGCGAGGCT 1027
|| |||||||||||| || | ||| || || || || || ||| || |||
Sbjct 186 GAAGGCTTTAAGTTC-GTCTTCCTGCAGTTCGTGAAGCAGCTGCGCGACAAGCCGTCGCT 244
Query 1028 AAGCGCGCTCTATATGGAATGATTCAAGCTTCCACCTATGATAATGAAGCCAATCTTCCT 1087
| | | | || || || | || || ||||| || || || |||||| ||
Sbjct 245 CAAGGAG--ATGTACGGCCTGGTGCAGGCCAGCACCTTCGACAACGAGCTCAATCTGCCG 302
Query 1088 GATGACTACATTGCATCATTGTTTGAGTCTTACCCACCTCAATTGATTTCAGCCTACTTA 1147
||||||||||| || || || | ||||| || || ||||| ||||| || ||| |
Sbjct 303 GATGACTACATCGCCTCCTTAATGGAGTCGTATCCGCCTCAGCTGATTATGGCGTACCTC 362
Query 1148 AAAGGGCAATTCGTAAA 1164
||||| || ||||| ||
Sbjct 363 AAAGGCCAGTTCGTCAA 379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130227686436166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |