Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq17400 102 1e-16 >seq17400 Length=8471 Score = 102 bits (112), Expect = 1e-16 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 201788 ACCATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCC 201847 |||||| |||||||| ||| | | | || | | ||| | || | || |||| Sbjct 4764 ACCATGCGCCAATATCTAGACCTTTTACAACATATCCTTGAACATGGTGGTGATAAAGGT 4705 Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907 || |||||||| || || || | ||||| || || | |||||||||||| || | Sbjct 4704 GATCGTACCGGAACAGGTACTCGTTCTGTATTTGGTCATCAGATGCGCTTTGACCTCTCT 4645 Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 |||| ||||| || | ||||| |||||||| || |||| || ||| || ||| ||| Sbjct 4644 AAAGGCTTTCCACTTTTAACCACAAAAAAGGTCCATTTTCGCTCTATCGTCGTTGAACTG 4585 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 | ||||| | | || || ||||| | | ||||| | || ||||| || || ||| Sbjct 4584 TTATGGTTTTTAAAAGGCGATACCAATGTGAAATATTTACAGGATAACAAAGTAACAATC 4525 Query 202028 TGGGACGAATGGGC 202041 ||||| |||||||| Sbjct 4524 TGGGATGAATGGGC 4511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787700675721480