Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq17400 107 3e-18
seq23168 86.0 1e-11
>seq17400
Length=8471
Score = 107 bits (118), Expect = 3e-18
Identities = 156/219 (71%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 196047 TTGAACGAAGGTCACGAGAAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGG 196106
|||||| | ||| || |||| ||| |||||||| || || || ||| | || ||
Sbjct 4727 TTGAAC-ATGGTGGTGATAAAGGTGATCGTACCGGAACAGGTACTCGTTCTGTATTTGGT 4669
Query 196107 TATCAGATGCGTTTTGACCTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCAC 196166
|||||||||| |||||||| ||||| || || || | ||||| |||||| | ||
Sbjct 4668 CATCAGATGCGCTTTGACCTCTCTAAAGGCTTTCCACTTTTAACCACAAAAAAGGTCCAT 4609
Query 196167 CTGCGATCTATCATCCACGAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTAT 196226
| || |||||| || |||||||| ||||| | || ||||| ||||| | | |||
Sbjct 4608 TTTCGCTCTATCGTCGTTGAACTGTTATGGTTTTTAAAAGGCGATACCAATGTGAAATAT 4549
Query 196227 CTGAAAGACAACAACGTCAGTATCTGGGATGAGTGGGCA 196265
| | || ||||| || | ||||||||||| ||||||
Sbjct 4548 TTACAGGATAACAAAGTAACAATCTGGGATGAATGGGCA 4510
>seq23168
Length=990
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 196953 CTGCCTAAGCTCGTTATCAAACGTAAACCGGATTCCATTTTCGACTATAAGTTCGAAGAT 197012
||||| | || || ||||| ||||| || | || || | ||||||||||||||||||
Sbjct 246 CTGCCGGAACTGGTGATCAAGCGTAAGCCTGCGTCGATCTACGACTATAAGTTCGAAGAC 305
Query 197013 TTTGAAATCGTGGGTTACGAAAGCCACCCACCCATTAAGGCACCGGTTGCCATCTAA 197069
|| ||||||||||||||||| | ||||| ||| ||||| || || ||||||
Sbjct 306 TTCGAAATCGTGGGTTACGACGCCGACCCAAGCATCAAGGCCGACGTGGCGATCTAA 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770011469437080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |