Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq6053 201 7e-47
seq6890 167 2e-36
seq15544 141 6e-29
seq12372 102 5e-17
seq7504 102 5e-17
>seq6053
Length=4391
Score = 201 bits (222), Expect = 7e-47
Identities = 508/767 (66%), Gaps = 8/767 (1%)
Strand=Plus/Plus
Query 96702 AGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCAT 96761
|||| || || || | ||| | |||| | || |||| | ||| ||||||||| || |
Sbjct 539 AGTTCTCGAAACGGGTGTACTTGCCGATGAACGCCAGGCGCACAAAGCCAATTGGCCCGT 598
Query 96762 TTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATAAA 96821
| || || || ||||| || | || || | ||| || ||| | || |||||||| |
Sbjct 599 TACGCTGTTTGCCGATGATGATTTCCGCCACGCCTTTGTGCTCGGTTTCGGGGTGATACA 658
Query 96822 CTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCAC 96881
| |||||||| |||| |||||||| | ||| ||||||||||| ||||| || |||||||
Sbjct 659 CCTCGTCGCGGTACACGAACATGATGACGTCGGCGTCCTGCTCGATTGCACCGGATTCAC 718
Query 96882 GTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTG 96941
| || || || || ||||| ||||||| || ||||| || || || || || || || |
Sbjct 719 GCAAGTCGGAGTTCACCGGGCGTTTGTTCGGGCGCTGCTCCAGAGAGCGGTTGAGCTGCG 778
Query 96942 ACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATC 97000
| | || | ||| || | ||| |||||||| |||| || || || || || || ||
Sbjct 779 AGAGGGCAATGACCGGGCAATTG-AATTCCTTGGCCAGGGCTTTGAGCGACCGGGAGATT 837
Query 97001 TCGGCAATTTCCAGCGTTCGGTTAT--CTTGCAGCTCCGGGACGC-GCATAAGTTGCAGG 97057
|||| ||| || ||| ||||| | | | || || ||| | |||| || ||||||
Sbjct 838 TCGGAAATCTCGTTCGTGCGGTTGTCACCCGAAGAACCAGGAATCTGCATCAGCTGCAGG 897
Query 97058 TAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGCGCGGGAA 97117
|| |||| ||| |||||| | |||| | || | || || | ||| |
Sbjct 898 TAATCGACCATGATCATGGCGATCTCACCGTGCTCGCGTGCCAGGCGTCGGGTGCGCGCG 957
Query 97118 CGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTTGTCCAAC 97177
|| | ||| | || | | | || | |||||| || || | || | | || | |
Sbjct 958 CGCATCTCCGATGGGCTGATGCCGGCGGTGTCATCGATGAACAACTTGCGGTCGTTTAGC 1017
Query 97178 AGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGA 97237
|| | || || | | || | ||| || |||||| | | ||| || | ||
Sbjct 1018 AGGTT---CACCGCCGACGTGAGGCGTGGCCAGTCGTCGTCGCTCAATTGACCGGAGCGC 1074
Query 97238 ATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTC 97297
| ||||| || | || | || || | ||| ||||| | |||| | ||
Sbjct 1075 ACCTTGGTCTGGTCGATACGACCCAGTGAGGACAGCATACGCATGACCAGCGATTCGCCT 1134
Query 97298 GGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAACTGCGGCATTTTCGACG 97357
||||| || || ||| |||| |||| ||| ||| |||| | |||| ||||| ||
Sbjct 1135 GGCATTTCCAGCGAAAACACCAGCACGGCCTTGTCGGTACGCAACACGGCGTTTTCCACC 1194
Query 97358 AGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGATGAGATCG 97417
|| ||||| || |||||||| || ||||| || || ||| | || || ||||| || |||
Sbjct 1195 AGGTTCATGGCGAACGTGGTTTTGCCCATCGAAGGCCGGCCCGCCACGATGATCAGGTCG 1254
Query 97418 GACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCCGGT 97464
| || |||||| || || |||| | || |||||| | |||||
Sbjct 1255 GCCGGCTGAAGGCCGCTGGTTTTCTCGTCCAGGTCGGTATAACCGGT 1301
>seq6890
Length=6377
Score = 167 bits (184), Expect = 2e-36
Identities = 239/336 (71%), Gaps = 3/336 (1%)
Strand=Plus/Minus
Query 96743 ACCGTGCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATT 96802
|| |||||| | ||||| || ||| ||| ||||| || | |||||||||||| || |
Sbjct 5039 ACGGTGCCAGTAGGGCCGTTGCGTGCCTTGCCGATGATGATCTCGGCAATGCCTTTGTAT 4980
Query 96803 TCGCTATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGC 96862
||| | | ||||||||| || |||||||| || | |||||||| | ||||||||||||
Sbjct 4979 TCGGTCTGCGGGTGATACACCTCGTCGCGGTAAACGAACATGATGACGTCTGCGTCCTGT 4920
Query 96863 TCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCA 96922
|| |||||||| ||||| ||||| ||||| || | ||| || |||| || ||| || ||
Sbjct 4919 TCGATTGCTCCGGATTCCCGTAAGTCTGAGTTGATCGGGCGCTTGTTCGGACGTTGCTCT 4860
Query 96923 AGCGATCGATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCC 96982
|| ||||| || || || || | || ||||| || | | |||||| || | ||
Sbjct 4859 AGGGATCGGTTGAGCTGCGATAGCGCGACCACTGGGCAGTTCATTTCCTTGGCAAGGGCT 4800
Query 96983 TTCAGTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACG 97042
|| || | ||||| || || || || | || ||| || | | ||| | |
Sbjct 4799 TTAAGGGCCCGAGAGATTGCGCTGATCTCGTTGGCTCTGTT---TTCCTGACCCGCGCAG 4743
Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGCTC 97078
||||| || |||||||| || |||| |||| ||||
Sbjct 4742 CGCATGAGCTGCAGGTAATCAATCAGGATCAGGCTC 4707
>seq15544
Length=893
Score = 141 bits (156), Expect = 6e-29
Identities = 408/623 (65%), Gaps = 10/623 (2%)
Strand=Plus/Minus
Query 96847 CAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTT 96906
|| ||| ||||||||||| || ||||| ||||| || || || || || ||||| || ||
Sbjct 893 CACGTCGGCGTCCTGCTCGATCGCTCCGGATTCCCGCAAGTCGGAGTTCACCGGACGCTT 834
Query 96907 GTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTA 96965
|| | ||| ||||| || || || || || || ||||| ||||||||| || | ||| |
Sbjct 833 GTTGGGACGTTGTTCCAGGGAACGGTTGAGCTGGGACAACGCCACCACCGGGCAGTTG-A 775
Query 96966 ATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTAT 97025
||||||| |||| ||||||| || ||||| || || | ||| || || ||||| |
Sbjct 774 ATTCCTTGGCCAGGGCCTTCAAGGAACGAGAGATTTCAGAAATCTCGTTGGTACGGTTGT 715
Query 97026 C----TTGCAGCTCCGGGACGCGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAA 97081
| || | | | |||| |||| | ||||||||||||||||| |||| | |
Sbjct 714 CGCCACTGGAAC-CGGGGATCTGCATCAACTGCAGGTAGTCGATCATGATCAGGGCGATG 656
Query 97082 CCACCATTTTCTTTATAAACACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCG 97141
| |||| || | || || | || | || | || | ||| | | |
Sbjct 655 TCGCCATGCTCACGCACCAGGCGCCGGGTACGCGCGCGCATTTCGGACGGGCTGATACCC 596
Query 97142 CTTGAGTCATCAATAAAAATATTCTGCTTGTCCAACAGAATACCCATTGCGCCAGAAACC 97201
| ||||||||| || | || | | || | ||| | || ||| | |
Sbjct 595 GCAGTGTCATCAATGAACAGCTTGCGGTCGTTGAGCAGGTTGACC---GCGGAGGTCAGG 539
Query 97202 CGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCA 97261
|||| ||| || ||||| | ||| || || | || | ||||| || | || ||
Sbjct 538 CGCGGCCAGTCGTCGTCTTCAAGCTGGCCGGAACGCACCTTGGTCTGGTCGATACGGCCA 479
Query 97262 AGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAAT 97321
|| || | || ||||| |||| | | || |||||||| ||| | ||||
Sbjct 478 AGCGACGAGAGCATACGCATGATCAACGATTCGCCTGGCATCTCGAGGGAGTACACCAGC 419
Query 97322 ACGGGCTTATCGTTACGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTC 97381
|| | ||| ||| | || | |||| ||||| || || |||||||| || ||||||||
Sbjct 418 ACCGCCTTGTCGCTGCGTAACACGGCGTTTTCCACCAGGTTCATCGCGAAGGTGGTCTTA 359
Query 97382 CCCATAGATGGGCGGGCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTC 97441
||||| || || || ||||||| ||||| | ||||||| ||| || || |||||
Sbjct 358 CCCATGGACGGACGACCGGCGACGATGATCAAGTCGGACGGCTGCAGGCCGCTGGTCTTT 299
Query 97442 TTATTGAGATCGGTAAATCCGGT 97464
| | ||| ||||| | |||||
Sbjct 298 TCGTCGAGGTCGGTGTAACCGGT 276
>seq12372
Length=38393
Score = 102 bits (112), Expect = 5e-17
Identities = 227/340 (67%), Gaps = 3/340 (1%)
Strand=Plus/Minus
Query 44701 GGCGAGCGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAAC 44760
||||| |||| | || |||||||||||| | ||| || ||||| || |||||||
Sbjct 38328 GGCGACCGCCTAGCAACTGCATGGTGCCGTTGATGTCGACAATGATTTCAGTGGTGTAAC 38269
Query 44761 GTTCTACACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCT 44820
| | | ||| | | || ||||| ||||||| || || |||||||||||| |
Sbjct 38268 GCTTGATGCCGTCCTTCTC---CCACTCGCGGGTTTGCAGCTTGCCTTCGATGTAGCATT 38212
Query 44821 GAGAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTT 44880
| |||||||| || | ||||| | || || || || | || |||||||| ||
Sbjct 38211 GGGAACCTTTGCGCAGGTACTCGCCGGCGATCTCGGCCACCTTGCCGAACAACGACACGC 38152
Query 44881 TATGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCG 44940
||||| || || |||| || || || |||||||||||| ||| || | |
Sbjct 38151 GGTGCCACTCGGTGCGCTCGACCTTCTGCCCGGTTTGCTTGTCGGTCCACTGCTCGCTGG 38092
Query 44941 TTGCGATGCTGAGTCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTT 45000
| || | |||||| | ||||| ||| ||||| | || | || || ||||| |
Sbjct 38091 TGGCCAGGCTGAGGTTAGTTACCGCGTTGCCGTTTGGCAGGTAACGGACTTCGGGGTCCT 38032
Query 45001 GCCCCAGGGTACCAATCAGGATGACTTTGTTTACACCGCG 45040
| || || |||| |||||| ||||| ||||| || ||
Sbjct 38031 GTCCGCAAGTCCCAACCAGGATCACTTTATTTACGCCACG 37992
>seq7504
Length=9783
Score = 102 bits (112), Expect = 5e-17
Identities = 226/337 (67%), Gaps = 9/337 (3%)
Strand=Plus/Minus
Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTG---ACGATAATTTCCGTCGTGTAACGTT 44763
|||| | || |||||||||||| | | || ||||| ||||| || ||||| || |
Sbjct 3137 CGCCCAGCAGCTGCATGGTGCCG---TTGATGTCAACGATGATTTCAGTGGTGTAGCGCT 3081
Query 44764 CTACACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAG 44823
| ||| | | || ||||| |||||| | || || |||||||||||| ||| |
Sbjct 3080 TGATGCCGTCTTTTTC---CCACTCACGGGTCTGCAGCTTGCCTTCGATGTAGCACTGCG 3024
Query 44824 AACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTAT 44883
||||||| || | ||||| | ||||| ||||||| || ||||||| || |
Sbjct 3023 AACCTTTGCGCAGGTACTCGCCGGCAATCTCAGCAACCTTGCCGAACAGCGACACACGGT 2964
Query 44884 GCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGTTG 44943
||||||| || |||| || ||||||| ||||||||| |||| || | ||||
Sbjct 2963 GCCATTCGGTACGCTCGACCTTCTGGCCCGACTGCTTGTCGGTCCATTGCTCGCTGGTTG 2904
Query 44944 CGATGCTGAGTCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTTGCC 45003
| | ||| || | || || || || || | || | || || || || || |
Sbjct 2903 CCAGGCTCAGGTTGGTCACGGCATTACCGTTGGGCAGGTAGCGGACTTCGGGATCCTGGC 2844
Query 45004 CCAGGGTACCAATCAGGATGACTTTGTTTACACCGCG 45040
| |||||| | ||| ||||||||||| || || ||
Sbjct 2843 CACAGGTACCGACCAGAATGACTTTGTTAACCCCACG 2807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330775339569358
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