Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq11692 95.1 2e-14 seq30076 91.5 2e-13 seq4096 89.7 6e-13 >seq11692 Length=22366 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19746 CATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCG 19805 |||||| | ||||||||||||||||||| | ||||||||||||| | |||||||||||| Sbjct 13756 CATTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 13815 Query 19806 AGCCCAGGTGGAGGAGC 19822 || |||||| | ||||| Sbjct 13816 AGTCCAGGTCGCGGAGC 13832 >seq30076 Length=4501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 3583 TTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAG 3642 Query 19808 CCCAGGTGGAGGAGC 19822 |||||| | ||||| Sbjct 3643 TCCAGGTCGCGGAGC 3657 >seq4096 Length=1707 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 165774 GGTCAAGGGTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGG 165833 ||||| | | | ||||||||||||||||||||| | ||||||||||| | ||||||||| Sbjct 1502 GGTCATGCGCCTGTAGCTCAGTTGGATAGAGCATCCGCCTTCTAAGCGGATGGTCACAGG 1561 Query 165834 TTCGAGTCCTGTCTGACCCGCC 165855 ||||| ||||||| | | |||| Sbjct 1562 TTCGAATCCTGTCAGGCGCGCC 1583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621831579397560