Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031925.1
Length=43788
Score E
Sequences producing significant alignments: (Bits) Value
seq698 663 0.0
>seq698
Length=3433
Score = 663 bits (734), Expect = 0.0
Identities = 691/904 (76%), Gaps = 2/904 (0%)
Strand=Plus/Plus
Query 2 GAAGCTGTAGCCGAACGGATGCAGCAACCACGTTTTACGCGTCCACAGGGTTTAAACACC 61
||| |||||||||| ||| ||||||| ||| || || || ||||||| || ||| ||
Sbjct 328 GAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCTCCACAGCACTTCAACGCC 387
Query 62 GCCGCCGTTGCCGCGGGACGCTTCGCGCTCGTATTCCAGCGGCATCTCAGGATTGCCTTC 121
||| ||||| ||||| | | ||| ||||||||| | || |||||| ||||||
Sbjct 388 GCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGGATGCTCAGGGGAGCCTTC 447
Query 122 GCCGTAACCGATAGCACCCTGGCCGAAGATGATGGAGATGAATTTACGGCTAG-TGCCCT 180
|||||||||||||||||||| || ||||| | | |||||| || | || || ||||
Sbjct 448 ACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAACTTGC-GCGAGCTGCCGG 506
Query 181 GACCAACTACGGTCATGCTGTCATCGACGATGACGCGGTAACCCTGGTAGGTGGCGAACA 240
|| | |||||||| |||||||| | | |||||| ||||||||||| |||| |
Sbjct 507 TGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGCCCTGGTAGGTCGCGATCT 566
Query 241 TGGTGTTGTTCTCAGCGTCACGGATGAAGTCGATAAGCTGAGCTTTACGCGCCTGCGCAT 300
||||||||| ||||||||||||||||||||||| | ||| |||||| | |||
Sbjct 567 GGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCTTCTTACGCATGTCGCCAT 626
Query 301 ATACGAAGCTGTGCATCGCGATAGCACCGAGAACCTCGCCACCATTACCCATCAATGCAT 360
| |||||||| |||| ||| || | ||||| |||| ||| ||| | |||||||| ||||
Sbjct 627 ACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCCGCCAGTCCCCATCAACGCAT 686
Query 361 CACCCATAGTCTGGGTAGCATCGATGAATGCACCTGCGTCGAAGCCTGAAGTTGCAGAAA 420
||||||| |||||||| || |||||||| || || || ||||| || || || ||||
Sbjct 687 CACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATCGAAACCGCCAGCAGCGGAAA 746
Query 421 CGTCGACCACCATGTCGTTCTGCTCGTGATATGCATCAGTAGCGGATACGTTGTCGTTGT 480
|||||| ||||||||||||||| || | |||||||| ||| | |||||||||||
Sbjct 747 CGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGTTGCGCCGATGTTGTCGTTGT 806
Query 481 ACAGACCGAGGGCGGTAGCAATCAGACGACGCTGTGCCTGGCGCTGCCAGAAGTTATCCA 540
| | ||| || | ||| || | ||| || ||||| |||||||||||||||||||| ||||
Sbjct 807 AGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTGGCGCTGCCAGAAGTTGTCCA 866
Query 541 GGCGAGAGGCTACAGACTGCAATGGATTCTGGCTAGTCAGTTCTACAGTCAGGTCTGCCT 600
|||||| || || || |||| || |||| ||| ||||| || ||||||||||| ||||
Sbjct 867 GGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAGCTCGACAGTCAGGTCGGCCT 926
Query 601 GGCCGAAACCTTCGTTCAGATATGCAACGCGGGCCATCATTTCACCGGTCTGAATAGCGC 660
|||| ||||||||||| || || ||||| ||||||| ||| || ||||| | ||| ||
Sbjct 927 GGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCATATCGCCGGTTTCAATGTTGC 986
Query 661 GCGGGGTCGCGATGTCCTGGTATACGTCATTCGAGTAGTTAGGCTCGATAGAAGTATCGA 720
|||| || | ||| ||| || || ||||||||||| ||||||| || | ||||
Sbjct 987 GCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTTCGGCTCGACGGATGCGTCGA 1046
Query 721 TAGCTTTCCAGAACGGCAGGTTAGCGATGTTAGACGGGCCGCGGGCAATCTCGGCAGCAT 780
| | |||||| |||| | ||| |||||||| ||||||||||| || ||||| ||||| |
Sbjct 1047 TCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCCGCGTGCGATCTCAGCAGCGT 1106
Query 781 ACGGAGTTGGGGTCAAAATTCCGGAGTTGAAAAACGCGGTTTTCTCTACCGGGTCTTCCG 840
|||| |||||||| | ||| ||||| | ||| |||||||| || || |||||||||| |
Sbjct 1107 ACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGTCTTTTCAACCGGGTCTTGGG 1166
Query 841 TCATATAGGACGCCAGTACGGGGATATTACCAGTTACGATGTTACCAATAGTGGTGATTG 900
||| || || | ||| || ||||| ||||| || | ||| ||||| || |||||||| |
Sbjct 1167 TCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGATATTACCGATCGTGGTGATAG 1226
Query 901 CCAT 904
|||
Sbjct 1227 GCAT 1230
Score = 104 bits (114), Expect = 7e-18
Identities = 100/126 (79%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 43646 ACGCCAGTTACCAGGAACGCAATCGGCACATGCTTGCGGTCGACTACACGGTTCCAGTTG 43705
|| ||||| |||||||| || ||||| | |||||||| || | || ||||||||||||
Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250
Query 43706 GCGGCGTTAGCCAGGTCCTGCCAGCTAGCGGAACG-GGCGATAGTCTCGGTGCCGTTGCC 43764
| ||| ||||| ||||||||| || || || |||| | |||||||||||||||||
Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCG-TGGTCTCGGTGCCGTTGCC 309
Query 43765 GGTGAT 43770
||||||
Sbjct 310 GGTGAT 315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139948939637500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |