Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq20974 111 2e-19 seq15277 98.7 1e-15 seq29930 89.7 5e-13 seq28164 89.7 5e-13 seq1102 87.8 2e-12 seq30698 86.0 7e-12 seq23530 86.0 7e-12 seq18462 86.0 7e-12 seq16622 86.0 7e-12 seq8544 86.0 7e-12 seq1839 86.0 7e-12 seq80 86.0 7e-12 seq18182 82.4 8e-11 seq11642 82.4 8e-11 >seq20974 Length=1049469 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | ||| ||||| | ||||| ||| | Sbjct 250903 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 250962 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| ||||| |||||||| ||||| || |||||||| || || ||||| ||||||| Sbjct 250963 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 251022 Query 23651 CCAC 23654 |||| Sbjct 251023 CCAC 251026 >seq15277 Length=4737824 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 || || || ||||| | |||||| |||||||| | || ||||| | |||||||||||| Sbjct 3367422 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 3367481 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| ||||| | ||||| || || |||||||| || || || || || |||||||| Sbjct 3367482 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 3367541 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 3367542 ACGACACGT 3367550 >seq29930 Length=628225 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 399083 CTCCTGGGCTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 399142 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 399143 CGCCACCGCGCC 399154 >seq28164 Length=9734536 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct 2559313 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACG 2559372 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 2559373 CGCCACCGCGCC 2559384 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 ||||||||| |||| | ||||| |||||||| ||||||| | ||||||||||||||| Sbjct 2559310 GAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGC 2559369 Query 8597 ATGAGCCACCGCGCCTGGC 8615 | | ||||||||||| ||| Sbjct 2559370 ACGCGCCACCGCGCCCGGC 2559388 >seq1102 Length=197652 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 125125 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 125184 Query 8465 AGCCACCACGCCAAGCTAATTTT 8487 ||||||||||| ||| |||| Sbjct 125185 CGCCACCACGCCCGGCTGTTTTT 125207 >seq30698 Length=1458934 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 1175178 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 1175119 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 1175118 CGCCACCACGCC 1175107 >seq23530 Length=2024980 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778 |||||||| |||| |||| || || ||||| || |||||| |||| | Sbjct 954665 TTTACACAAGGCGTTGTCTCAACGGCGTTGAAGAGGAATTCCCTTTCTTTGGAATCTTTA 954724 Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || || ||| | || | ||| |||||||||||||| || ||||| || ||||| || Sbjct 954725 ATGTAAGTGTCAGTGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 954784 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || ||||| || | | ||||| | | ||||| || | || | | | || Sbjct 954785 AAGCCATAGAAGTAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAAG 954844 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 ||||| || || || |||||||| || ||| ||||||| |||||| Sbjct 954845 TTTTCATTTACTATGCCATCACTTGCTGCAGAGAAAGCCAGAACA 954889 >seq18462 Length=2232633 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct 2082508 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 2082449 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 2082448 CGCCACCGCGCC 2082437 >seq16622 Length=1053215 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| | ||||||||||||||||| |||||||||||| |||||||| | Sbjct 296267 CTCCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACA 296208 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 296207 CGCCACCGCGCC 296196 >seq8544 Length=94178 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 73005 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTG 73064 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 73065 CGCCACCACGCC 73076 >seq1839 Length=936306 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct 312188 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 312129 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 312128 CGCCACCGCGCC 312117 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 523248 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 523307 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 523308 CGCCACCACGCC 523319 >seq80 Length=2467409 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 1877615 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 1877674 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 1877675 CGCCACCACGCC 1877686 >seq18182 Length=4802627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 ||||||||| |||| ||||||| |||||||| ||||||| | |||| || ||||||| Sbjct 2589591 GAACTCCTGGGCTCACGTGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGAGACTACAGGC 2589532 Query 8597 ATGAGCCACCGCGCCTGGCCCTT 8619 | | ||||||||||| ||| ||| Sbjct 2589531 ACGCGCCACCGCGCCCGGCTCTT 2589509 >seq11642 Length=1234062 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||| ||| ||||||||| | Sbjct 112633 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCTGAGTAGGTGGCATTACAGGCTCA 112574 Query 8465 AGCCACCACGCCAAG 8479 |||||||| || || Sbjct 112573 GGCCACCACACCCAG 112559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521287794238200