Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq20974 111 2e-19
seq15277 98.7 1e-15
seq29930 89.7 5e-13
seq28164 89.7 5e-13
seq1102 87.8 2e-12
seq30698 86.0 7e-12
seq23530 86.0 7e-12
seq18462 86.0 7e-12
seq16622 86.0 7e-12
seq8544 86.0 7e-12
seq1839 86.0 7e-12
seq80 86.0 7e-12
seq18182 82.4 8e-11
seq11642 82.4 8e-11
>seq20974
Length=1049469
Score = 111 bits (122), Expect = 2e-19
Identities = 99/124 (80%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | |||||| ||||| || | ||| ||||| | ||||| ||| |
Sbjct 250903 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 250962
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || |||||||| || || ||||| |||||||
Sbjct 250963 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 251022
Query 23651 CCAC 23654
||||
Sbjct 251023 CCAC 251026
>seq15277
Length=4737824
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
|| || || ||||| | |||||| |||||||| | || ||||| | ||||||||||||
Sbjct 3367422 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 3367481
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||| | ||||| || || |||||||| || || || || || ||||||||
Sbjct 3367482 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 3367541
Query 23653 ACAAGACGT 23661
|| | ||||
Sbjct 3367542 ACGACACGT 3367550
>seq29930
Length=628225
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 399083 CTCCTGGGCTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 399142
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 399143 CGCCACCGCGCC 399154
>seq28164
Length=9734536
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 2559313 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACG 2559372
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 2559373 CGCCACCGCGCC 2559384
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
||||||||| |||| | ||||| |||||||| ||||||| | |||||||||||||||
Sbjct 2559310 GAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGC 2559369
Query 8597 ATGAGCCACCGCGCCTGGC 8615
| | ||||||||||| |||
Sbjct 2559370 ACGCGCCACCGCGCCCGGC 2559388
>seq1102
Length=197652
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 125125 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 125184
Query 8465 AGCCACCACGCCAAGCTAATTTT 8487
||||||||||| ||| ||||
Sbjct 125185 CGCCACCACGCCCGGCTGTTTTT 125207
>seq30698
Length=1458934
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 1175178 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 1175119
Query 8465 AGCCACCACGCC 8476
|||||||||||
Sbjct 1175118 CGCCACCACGCC 1175107
>seq23530
Length=2024980
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778
|||||||| |||| |||| || || ||||| || |||||| |||| |
Sbjct 954665 TTTACACAAGGCGTTGTCTCAACGGCGTTGAAGAGGAATTCCCTTTCTTTGGAATCTTTA 954724
Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838
|| || || ||| | || | ||| |||||||||||||| || ||||| || ||||| ||
Sbjct 954725 ATGTAAGTGTCAGTGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 954784
Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898
|| ||||| || | | ||||| | | ||||| || | || | | | ||
Sbjct 954785 AAGCCATAGAAGTAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAAG 954844
Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943
||||| || || || |||||||| || ||| ||||||| ||||||
Sbjct 954845 TTTTCATTTACTATGCCATCACTTGCTGCAGAGAAAGCCAGAACA 954889
>seq18462
Length=2232633
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 2082508 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 2082449
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 2082448 CGCCACCGCGCC 2082437
>seq16622
Length=1053215
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| | ||||||||||||||||| |||||||||||| |||||||| |
Sbjct 296267 CTCCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACA 296208
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 296207 CGCCACCGCGCC 296196
>seq8544
Length=94178
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 73005 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTG 73064
Query 8465 AGCCACCACGCC 8476
|||||||||||
Sbjct 73065 CGCCACCACGCC 73076
>seq1839
Length=936306
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 312188 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 312129
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 312128 CGCCACCGCGCC 312117
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 523248 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 523307
Query 8465 AGCCACCACGCC 8476
|||||||||||
Sbjct 523308 CGCCACCACGCC 523319
>seq80
Length=2467409
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 1877615 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 1877674
Query 8465 AGCCACCACGCC 8476
|||||||||||
Sbjct 1877675 CGCCACCACGCC 1877686
>seq18182
Length=4802627
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
||||||||| |||| ||||||| |||||||| ||||||| | |||| || |||||||
Sbjct 2589591 GAACTCCTGGGCTCACGTGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGAGACTACAGGC 2589532
Query 8597 ATGAGCCACCGCGCCTGGCCCTT 8619
| | ||||||||||| ||| |||
Sbjct 2589531 ACGCGCCACCGCGCCCGGCTCTT 2589509
>seq11642
Length=1234062
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||| ||| ||||||||| |
Sbjct 112633 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCTGAGTAGGTGGCATTACAGGCTCA 112574
Query 8465 AGCCACCACGCCAAG 8479
|||||||| || ||
Sbjct 112573 GGCCACCACACCCAG 112559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521287794238200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |