Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq19 123 2e-23 seq1 122 7e-23 seq33 118 9e-22 seq34 114 1e-20 seq36 100 2e-16 seq14 89.7 4e-13 seq39 84.2 2e-11 >seq19 Length=38964370 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| |||||||||||| || ||||| ||||| | |||||| | | || Sbjct 5007387 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007328 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| ||| | || | ||||||||||| ||| | ||| |||||||| Sbjct 5007327 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007268 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| || |||| ||||||| |||| || |||||| Sbjct 5007267 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 5007208 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || || || || || || || |||||| Sbjct 5007207 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq1 Length=122647182 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| |||||||||||| || ||||| ||||| | |||||| | | || Sbjct 14843733 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 14843792 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| ||| | || | ||||||||||| ||| | ||| || || || Sbjct 14843793 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCT 14843852 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||| || | ||| || |||| ||||||| |||| ||| |||||| Sbjct 14843853 TGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14843912 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || || || || || || ||||| Sbjct 14843913 TTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq33 Length=88276357 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || ||||| | || | || |||| |||| ||| |||||||| || ||||| ||||| Sbjct 13711008 TTCCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCG 13710949 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | |||||| | || ||||||||||||| ||| | || | ||||||||||| | Sbjct 13710948 GACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGG 13710889 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||||||||| ||||||| || || | ||| || ||| ||||||| Sbjct 13710888 GGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCC 13710829 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || || || || || || || ||||| Sbjct 13710828 ACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| |||||| ||||| || ||||| ||||| | ||||| | | || Sbjct 13711218 AGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGTAGGGTGCGCCCATCT 13711159 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| ||| | || | |||||||||| || ||| | ||| || || || Sbjct 13711158 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGT-CAGGGGGATGCCCTCTTTTTCT 13711100 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||| || | ||| || |||| ||||||| |||| || |||||| Sbjct 13711099 TGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 13711040 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || || || || ||||| || |||||| Sbjct 13711039 TTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq34 Length=88915096 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| ||||| || || ||||| || || | || || || | || |||||||| ||||| Sbjct 47887885 AGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCC 47887826 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || || ||||||||||| ||| | ||| || || || |||||| || Sbjct 47887825 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 47887766 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | ||| || |||| ||||||| |||| ||| |||||||||||||| | || Sbjct 47887765 CACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 47887706 Query 21158 TTTGACAAATATTTGCATTTTGA 21180 ||| || || || |||||||||| Sbjct 47887705 TTTCACGAAGATCTGCATTTTGA 47887683 >seq36 Length=80974255 Score = 100 bits (110), Expect = 2e-16 Identities = 159/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||||||| ||||| |||||||| || ||| | || ||||| | | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGAC 43111141 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| || | || || ||||||||||||||| |||| || | ||||||||| || Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| ||| || ||| || | | || |||| |||||| Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111261 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || || ||||| | | || || ||||| || ||||| Sbjct 43111262 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq14 Length=50855280 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| | | ||| ||||| || || ||||| | || | | Sbjct 29349334 CCCCTC--AGACGGAGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAAA 29349277 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || ||| | || |||||||| ||||| ||| | || || ||||||||||| ||| | Sbjct 29349276 GAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGA 29349217 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||| || || || |||||| ||||| | ||| || ||| ||||||| | Sbjct 29349216 TGCCCTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCCACCT 29349157 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | | |||||||||| ||| | || || || || || ||||| Sbjct 29349156 CCAGGATGATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 >seq39 Length=123855249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| ||||||||||||||||||||| ||||| | | Sbjct 84732084 CCACCACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGC 84732025 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | |||||||| || ||||| ||| | || ||||||||||| || || Sbjct 84732024 AAAGTACGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGG 84731965 Query 21069 ACGCCTTCCTTGTC 21082 | |||||||| || Sbjct 84731964 ATTCCTTCCTTATC 84731951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255067533948