Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq24 1674 0.0 seq1 147 2e-30 >seq24 Length=40212183 Score = 1674 bits (1856), Expect = 0.0 Identities = 1405/1723 (82%), Gaps = 61/1723 (4%) Strand=Plus/Plus Query 107085 CCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAAG------- 107137 |||||||||| |||| ||||| || ||| |||| ||| ||||| ||||| Sbjct 24484407 CCCAGCATGAACAGCTAGTTTGTAGGGTCAAGTTAAAGACCTCCATGGACAAGCTGGGAG 24484466 Query 107138 ------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTT 107191 | || |||||||| |||||| |||||| ||||||| |||||| || ||||| Sbjct 24484467 AAAGAGGTTCCTAGGCAGGTCTTGACCAAGGATACTTGTCTAGAGAAGAAATACCTCTTT 24484526 Query 107192 ACCATCACTCTGGAGTTGAACTTGATGTTCT--------------GGATTAGTTTGTAAT 107237 | |||||| |||||||||||||| ||||| || |||||||||||| Sbjct 24484527 GCTATCACTTTGGAGTTGAACTTGCTGTTCCTGTGAATACATTCAGGGTTAGTTTGTAAT 24484586 Query 107238 TAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCAC---CTTGCCTGTGCCCAAACT 107294 | ||| ||||||||||||||||||| | | ||||| || ||| |||||||||||||| Sbjct 24484587 TGAAGACATTTTGTTCTGTCCAAGGCTTCCATCCTCTACTTGCTTTCCTGTGCCCAAACT 24484646 Query 107295 CTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACAT 107354 | ||| | || ||| ||||||||||| | ||||||||||| ||| ||||| ||| Sbjct 24484647 CCACTGGTTTCTCATTCCATGAAGATGATTTGGTGGAAGAAGC-GCT--GCCGGCAGCAT 24484703 Query 107355 CATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTC 107414 | ||||||||||||||||||||| |||||||||| |||||| |||||||| |||| || Sbjct 24484704 TACCTGTGGGCCCTGGGCTGCTATGTGCTGCTGGCTGTTGTTGCTCTGAGATTTTCTCTT 24484763 Query 107415 AGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCAC 107474 || || |||||||| | || ||| |||||||||||||||| || || | || |||||| Sbjct 24484764 AGATTGAAATGTGACTTTGACTCCCTGGATCTGGAGTCCAGAGATTTTCGAAGCCAGCAC 24484823 Query 107475 TGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCT 107534 ||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct 24484824 TGTAGGGACATCTTGTACCAGTCGCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCT 24484883 Query 107535 GGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTG 107594 |||||| ||||||||| | |||||||| |||| ||||| ||||||||||| || Sbjct 24484884 AGGATCATCCGAGGGGACTGGCAAGCAGTGTCGGAGGCTCTCCTGGACAACCTGGAGGTC 24484943 Query 107595 AAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAG 107654 ||||| ||| || |||| | || | ||| | ||||| ||||| ||| ||||||||||| Sbjct 24484944 AAGAAGAAGTGGAAGCCTTTAACAGACACGGACTACCTTAACATGACCCGAGACTGTGAG 24485003 Query 107655 CGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTC 107714 | ||| |||||| ||||||||||||||| |||||| ||||| ||||||||| |||||||| Sbjct 24485004 CACTTTAAGGCCAAAAGGAAGTTCATACGGTTCCCTCTGAGCAAAGAAGAGTTAGACTTC 24485063 Query 107715 CCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGA 107774 || ||||| ||||| |||||||||||||||||||| |||||||||||| | ||||||||| Sbjct 24485064 CCAATTGCATACTCTATGGTGGTCCATGAGAAGATAGAAAACTTTGAAAGACTGCTGCGA 24485123 Query 107775 GCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACT 107834 || ||||||| ||||||||||||||||||||||| ||||||| ||| |||||||| ||| Sbjct 24485124 GCTTTGTATGCTCCTCAGAACATATACTGTGTCCATGTGGATGAGAAATCCCCAGAAACT 24485183 Query 107835 TTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAG 107894 ||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||| Sbjct 24485184 TTCAAAGAGGCAGTCAAGGCGATTATTTCATGCTTCCCAAATGTCTTCATAGCCAGTAAG 24485243 Query 107895 TTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAA 107954 ||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 24485244 TTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTGAACTGTATGGAA 24485303 Query 107955 GACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTC 108014 |||||||||| |||||||||||||||||| |||||||| |||||||| |||||||| || Sbjct 24485304 GACTTGCTCCGGAGCTCAGTGCCATGGAAATACTTACTAAATACATGTGGGACAGATTTT 24485363 Query 108015 CCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGT 108074 || |||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||| Sbjct 24485364 CCTATAAAGACCAATGCGGAGATAGTCCTGGCCCTCAAGATGTTGAATGGGAAGAATAGT 24485423 Query 108075 ATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTG 108134 |||||||| || |||| |||||| ||| || |||||||||||| | ||||||||| Sbjct 24485424 ATGGAGTCAGAAAAACCTACTGAGTACAAGAAGTCTCGCTGGAAATATCACTATGAGGTA 24485483 Query 108135 ACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATG 108194 ||||||||| ||||| ||||||||||||||||| ||||| ||||| ||| |||| || Sbjct 24485484 ACAGACACATTGTACATAACCAGCAAGATGAAGGATCCTCCTCCTGAGAATATACCTATA 24485543 Query 108195 TTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAAC 108254 |||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||| ||| Sbjct 24485544 TTCACAGGGAATGCCTATATTGTGGCTTCTCGAGACTTTGTCCGACATGTCTTAGAGAAC 24485603 Query 108255 CCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTC 108314 || || || | ||||||| |||||||||| || ||||||||||||||||| || || || Sbjct 24485604 CCCAAGTCTCGAAGACTGATTGAATGGGTAAAGGACACCTATAGCCCCGATGAGCATCTA 24485663 Query 108315 TGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTAT 108374 ||||| |||||||||||||| || |||||||| || ||| ||||| ||| ||||||| | Sbjct 24485664 TGGGCTACCCTTCAGCGTGCACCATGGATGCCCGGTTCTATTCCTTACCATCCCAAGTTT 24485723 Query 108375 CACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGAT 108434 |||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||| Sbjct 24485724 CACATCTCAGACATGATAGCCATTGCCAGGCTGGTCAAGTGGCAAAGCCATGAGGGAGAC 24485783 Query 108435 GTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATT 108494 |||| ||||| || |||||||| || |||||||||||||| | | || | ||||| ||| Sbjct 24485784 ATCAGTATGGGAGCACCTTATGCCCCTTGCTCTGGAATCCACCAGCGGTCTATCTGTATT 24485843 Query 108495 TACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTT 108554 || ||| ||||||||| |||||||||| || ||||||||||| ||||| ||||||||| Sbjct 24485844 TATGGGATTGGGGACCTGCACTGGATTCTTCAAAACCATCACCTGTTGGCCAACAAGTTT 24485903 Query 108555 GACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCC 108614 ||||| | ||||||||| || || || |||||||||||||||||| ||||| |||||||| Sbjct 24485904 GACCCAAAGGTGGATGACAATGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGCC 24485963 Query 108615 ATCTATGGGACTGAACTTTGAG----------------CTGC--ACTGTGGGCCAGGGAC 108656 ||||||||||||||||| |||| ||| ||||||| |||| || Sbjct 24485964 ATCTATGGGACTGAACTCTGAGATATCCCATCATAATATTGCTACCTGTGGGGCAGGAAC 24486023 Query 108657 -TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGA 108715 | ||| |||||||||||| || |||| || || |||||||| ||||| | | Sbjct 24486024 ATATGCAGACATGCCCAGGGGGTGCTGGGAC--AGTAGGGTGGGG---TGGGGCTCTAAA 24486078 Query 108716 ATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTGATGGGGT 108758 ||| ||| |||||| | ||||| |||||||| || ||||| Sbjct 24486079 ATCTTTGGGATCCCCAA--GTCAGGGGGCTGCTATG--GGGGT 24486117 >seq1 Length=122647182 Score = 147 bits (162), Expect = 2e-30 Identities = 576/895 (64%), Gaps = 47/895 (5%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||||||||||| ||| || ||||| || || || || || || ||| | || Sbjct 81959084 CCCCTTAGTAAAGAAGAAGCAGAATTTCCCATAGCATATTCTATAGTAGTTCATCACAAA 81959025 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| | |||| |||| ||| | ||| | || |||||||| | ||||| | Sbjct 81959024 ATTGAGATGCTTGACAGGCTCCTGAGGGCCATCTACATGCCTCAGAATTTCTACTGCATT 81958965 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| || ||| || | ||| | || || | |||| |||||| Sbjct 81958964 CACGTGGACAAAAAATCCGAGGATTCCTTCTTGGCTGCCGTGCTTGGCATTGCGTCCTGC 81958905 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| || ||||| |||||||| || | | ||||| |||||||| ||| || Sbjct 81958904 TTCAGTAACATCTTCGTGGCCAGTCAGCTAGAGAGTGTGGTATATGCCTCATGGAGTCGA 81958845 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGC-TCAGTGCCA--TGGAAG 107984 || || |||||||| ||||| ||| | ||| ||||| || | ||||| |||||| Sbjct 81958844 GTTCAGGCTGACCTCAACTGCATGCAGGAC---CTCCATAGGATGAGTGCAGACTGGAAG 81958788 Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTG 108044 ||||| | ||| || || | || || || || || ||||| || || |||| | Sbjct 81958787 TACTTGATAAATCTTTGTGGCATGGATTTTCCTATCAAAACCAACTTGGAAATTGTCCGG 81958728 Query 108045 GCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCC 108101 ||||| | | | |||| | |||| | || ||||| | || || | | Sbjct 81958727 AAGCTCAAATCGCTAATGGGTGAAAACAACCTAGAAACTGAGAGAATGCCATCCAA---C 81958671 Query 108102 aaaaaaaaTCGCTGGAAA--------TACCGCT----ATG---AGGTGACAGACACACTG 108146 |||||| | | |||||| ||| | | ||| || |||| ||||| | Sbjct 81958670 AAAAAAGAAAGGTGGAAAAAGCATTTTACAGTTGTTAATGGAAAGCTGACCAACACAGGG 81958611 Query 108147 TACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAAT 108206 || ||| ||| | || || | ||| | ||| | || |||| | | Sbjct 81958610 ------ACTGACAAAATGCAT---CCACCTCTTGAAAC---ACCTCTATTTTCAGGCAGT 81958563 Query 108207 GCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAA 108266 || |||||||||| | | | | ||| || |||| || | || ||| |||| Sbjct 81958562 GCTTATTTTGTGGTCAGTAGGAAGTATGTAGAATATGTGCTAAAGAATGAAAAAATCCAA 81958503 Query 108267 AGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTT 108326 | | | || |||| |||||||| || ||||| || || ||||||||||||| || Sbjct 81958502 AAGTTTATGGAGTGGGCAAAAGACACATACAGCCCTGATGAGTACCTCTGGGCCACTATT 81958443 Query 108327 CAGCGTGCTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTC 108382 ||| | | ||| || | | || ||||| | |||| ||||| |||||| |||| || Sbjct 81958442 CAGAG-GATCCCTGAAGTCCCAGGCTCGCTGTCCTTAAGCCAG---AAGTATGACATGTC 81958387 Query 108383 AGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCAT 108442 |||||| ||| ||||| ||| | ||||| ||||||||| || || ||||| | Sbjct 81958386 TGACATGCATGCAATCGCAAGGTTTGTCAAATGGCAGTACTTTGAAGGTGATGTTTCTAA 81958327 Query 108443 GGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGC 108502 ||| || || || |||| ||| ||| ||||| | | | | || ||| ||| || Sbjct 81958326 GGGTGCCCCCTACCCACCGTGCAGTGGGGTCCATGTGCGTTCTGTGTGTGTTTTCGGAGC 81958267 Query 108503 CGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || ||| || ||||||| || | || || ||| | || || |||||||||||| Sbjct 81958266 AGGTGACTTGAACTGGATGCTACGCAAGCACCACTTGTTTGCCAACAAGTTTGAC 81958212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348265391645622