Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 129 5e-25 seq9 93.3 4e-14 seq33 89.7 5e-13 seq36 82.4 7e-11 >seq14 Length=50855280 Score = 129 bits (142), Expect = 5e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || |||||||| ||||| || || || ||||| || || ||||| Sbjct 26617831 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 26617772 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 ||||| || |||||||||||| ||||| || ||||| ||||||||||||||||| || Sbjct 26617771 CCCAAGTTCTGCTGGTTGCTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 26617712 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| ||||| || Sbjct 26617711 CCTGTCTCTGTCTGAGACTCAATGATGGC 26617683 >seq9 Length=64259867 Score = 93.3 bits (102), Expect = 4e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || || ||||| ||||| || ||||||||||| |||||| ||||||| ||| | Sbjct 7102921 GCCTTTGCTGCCGTGGAAGGAATCTTCTTTTCGGGTTCTTTTGCGTCAATATTCTGGCTC 7102980 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 |||||||| ||||||||||| ||||| |||||| ||| || Sbjct 7102981 AAGAAACGGGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 7103021 >seq33 Length=88276357 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| || || || || || | || || || || Sbjct 13710778 CATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTGGAGGTGGAGCCCAA 13710837 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | ||||| || ||| | ||||||||||||| | || || |||| Sbjct 13710838 TGACACCATCGAGAATGTCAAGGCAAAGA-TCCAGGACAAGGAAGGCATCCCCCCTGACC 13710896 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTAT 31369 ||||| | | || || || |||||||| ||||||| | || || || ||| || Sbjct 13710897 AGCAGAGGTTGATCTTTGCCAGCAAACAGCTGGAAGA-TGGGTGCACCCTGTCCGACTAC 13710955 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||| || ||||| ||| | || ||||| || Sbjct 13710956 AACATCCAGAAGGAGTCAACTCTGCACCTGGTCCTTCGCCTCAGGGGGGG 13711005 >seq36 Length=80974255 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| |||||||| |||||| | || || || || Sbjct 43111308 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 43111249 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| |||||| | ||| ||||| || ||| | || || |||||| Sbjct 43111248 GACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCAG 43111189 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || || ||||||||| | ||||| Sbjct 43111188 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGA 43111154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761925619760