Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq36 125 6e-24 >seq36 Length=80974255 Score = 125 bits (138), Expect = 6e-24 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || || || |||||||| |||||||||||||| ||||||||| Sbjct 5935608 GGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 5935549 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || | ||| || || |||| || |||||||| | ||||| ||||| ||||||| ||| Sbjct 5935548 CCCCGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCTTGGGAGAGAAG 5935489 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 ||||| || || | || | ||||| ||||| Sbjct 5935488 CTCAAGACCCTCAGGCTGAGGCTGCGACGCTG 5935457 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151 ||| ||||| ||| || ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 5933453 GCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 5933394 Query 129152 AGAATCATACATGAC 129166 |||| | |||||||| Sbjct 5933393 AGAAACCTACATGAC 5933379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447745905705360