Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq36 129 6e-25 >seq36 Length=80974255 Score = 129 bits (142), Expect = 6e-25 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || |||||||| || ||||||||||||||| ||||||| || | Sbjct 5935610 AGGGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGA 5935551 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| | |||||| || || ||||| || ||| | ||||||||||| |||| |||| Sbjct 5935550 TGCCCCGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCTTGGGAGAGA 5935491 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||||||| ||||| Sbjct 5935490 AGCTCAAGACCCTCAGGCT 5935472 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| ||||| ||||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 5933454 AGCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5933395 Query 10419 TAGAAGCATACATGACCATGA 10439 ||||| | |||||||| |||| Sbjct 5933394 TAGAAACCTACATGACAATGA 5933374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547373705681280