Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq36 167 3e-36 >seq36 Length=80974255 Score = 167 bits (184), Expect = 3e-36 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 8690 AACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATC 8749 || ||||| || || ||||| | |||| ||||||||||| | ||| | |||| ||| Sbjct 19669707 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669766 Query 8750 CCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACG 8809 ||| || || ||||| || |||||||| || |||||||| | || || |||||| Sbjct 19669767 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669826 Query 8810 TTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAG 8869 || |||| || ||||| | ||| || || || |||| || | ||| ||||||| ||| Sbjct 19669827 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19669886 Query 8870 ATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATG 8929 ||||| | ||||| |||||||| ||||||| | | |||| ||||| || || || Sbjct 19669887 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19669946 Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976 || || ||||||||| | | ||||| |||||||| |||||||| Sbjct 19669947 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCTGT 19669993 Score = 143 bits (158), Expect = 4e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| | || ||| ||||||||| || || |||| || ||||| |||||| Sbjct 19671228 GTCTGGAACAACCGCTCATCATCCCATTCTGGGTGCTCCTGTTTAAGCACATCACACACT 19671287 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||| || |||| ||||| || || || |||||||| |||||||||||||| ||||| Sbjct 19671288 CTGTTATGCTCCCGCAGCCAAATGGTGGCATACATCATCAGACCAGGCACCAGACCAAAG 19671347 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 |||| || || ||||| | ||| | ||| || || | || || |||||||| | Sbjct 19671348 ACCTCCTGGCCCACAGCAAACTGCAGGTGTTCAGGAACATGAGGTGGGTAGATCATCTCG 19671407 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857 ||||| ||||||||| | || ||||||| || || ||||| Sbjct 19671408 ACCTGAGTATCTTTGACAGTAGGAGGATACACCTCTCCATCAAT 19671451 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 10027 TTCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAA 10086 ||||||||||||| |||| |||||| ||||| || || |||||| ||| ||| | | Sbjct 19672211 TTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGA 19672270 Query 10087 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 10146 |||| || || || || || ||| |||| || |||||||| | |||||||| ||||||| Sbjct 19672271 AAAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGAT 19672330 Query 10147 CGGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAt 10206 | ||| |||| | || || |||||| |||||||||| | | | ||| || || | Sbjct 19672331 CAGGAATGAACTTTCTTCGCAGAAGAAACTTTTCCACAATCTCTTTTGAATCAGGAAGCT 19672390 Query 10207 tttttttACCTGGTGAACGAGAA 10229 ||| || |||| ||| ||||| Sbjct 19672391 CTTTCTTGCCTGAAGAATGAGAA 19672413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708517688182320