Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq33 125 6e-24 seq1 113 4e-20 seq19 111 1e-19 seq34 95.1 1e-14 seq36 91.5 1e-13 >seq33 Length=88276357 Score = 125 bits (138), Expect = 6e-24 Identities = 169/234 (72%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || ||||| ||||| |||| |||||||||| ||| |||||||| || | ||| || Sbjct 13711240 TTAGACACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTA 13711181 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 ||| | ||| ||| ||||||||||| ||| ||||||| || || ||||| || Sbjct 13711180 GTCGGGTAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTC 13711121 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 || || || || ||||| || | || || | ||||| ||| |||||| | | Sbjct 13711120 AGG-GGGATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGG 13711062 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || ||||| | || ||||||||||||||||| Sbjct 13711061 CTCCACCTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||||| ||| || ||||| || | ||| || ||| || ||| ||| ||| Sbjct 13710987 ACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCC 13710928 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| | | ||||||| || || ||||| || || || || ||||| ||||| | Sbjct 13710927 AGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGG 13710868 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||||||||||| ||| |||||| | | || || || | || ||||| || Sbjct 13710867 ATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTA 13710808 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| | || ||||| ||||||||||||| Sbjct 13710807 CCAGTCAAGGTCTTCACGAAGATCTGCATGC 13710777 >seq1 Length=122647182 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||||||| ||| || ||||| || | ||| || ||| || ||| | Sbjct 14843730 CGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 14843789 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || ||||||||||| ||| ||||||| || || ||||| || || || || || ||||| Sbjct 14843790 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTT 14843849 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||||| ||| |||||| | | || || || | |||||| Sbjct 14843850 TCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || ||||| | || ||||| ||||||||||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATGC 14843946 >seq19 Length=38964370 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||||| ||| || ||||| || | ||| || ||| || ||| ||| ||| Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| ||| ||||||| || || ||||| || || || || || || ||||| | Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||||||| ||| |||||| | | || || || | |||||||| || Sbjct 5007264 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTA 5007205 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || ||||| ||||||||||| Sbjct 5007204 CCCGTCAAGGTCTTCACGAAGATCTGCAT 5007176 >seq34 Length=88915096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 94801 CAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAG 94860 || ||| | ||| || || || || | ||| ||||| | |||| | ||| ||||| Sbjct 47887894 CAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAG 47887835 Query 94861 CTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAAT 94920 ||| || || ||||||| | || ||||| || || || || || ||||| || | || Sbjct 47887834 CTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGAT 47887775 Query 94921 TTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCC 94980 || ||||| ||| ||| |||||| | | || || || | |||||||| || || Sbjct 47887774 CTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 47887715 Query 94981 AGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || |||||||| ||||||||||| Sbjct 47887714 GGTCAGGGTTTTCACGAAGATCTGCAT 47887688 >seq36 Length=80974255 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || | |||||||||||| || || || || || | || || || | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGAC 43111141 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || |||||||| || |||| || | | ||||| || || || Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | ||||| || ||||| | |||||| | | ||||| Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111261 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| ||||| || | || || ||||||||||||||||| Sbjct 43111262 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286700277080