Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 5e-13 seq9 86.0 7e-12 >seq5 Length=63240551 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||||||||| ||||| || | ||| ||||||||| ||| || ||||| | | Sbjct 3797937 TTTAAAAATCTGCATCCAAGGTGAAGACATTATCTGTAGTTTCTGCCATAACCGCAAAAC 3797996 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 |||||| || ||||| ||| || || ||||| || || ||||| || || || || Sbjct 3797997 GTTGATACTCTGCAACTCGTTTCTCAAAGAAATTAGTTTTCCCTTCTAAAGAAATGTTTT 3798056 Query 21246 CCATAAAATCAAATGGATTTTC 21267 ||||||||||||| |||||||| Sbjct 3798057 CCATAAAATCAAAGGGATTTTC 3798078 >seq9 Length=64259867 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 21121 ATTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCC 21180 ||| | ||| || |||||||| || | || ||| ||| | ||||||| | ||| Sbjct 7104469 ATTCACTTAGAAGTCAGCATCCAAGGTAAACGAATTCTCTGTTGGACTTGACATCACTCC 7104410 Query 21181 CATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATAT 21240 ||| | ||||| || | ||||| || || || || || ||||| ||||||| ||| || Sbjct 7104409 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAAT 7104350 Query 21241 AGATTCCATAAAATCAAATGGATTTTC 21267 | |||||||| |||||||||||||| Sbjct 7104349 ATTCTCCATAAAGTCAAATGGATTTTC 7104323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||| || || || | |||||| ||||| || | || ||||| | || | || || Sbjct 7103039 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCCCGTTTCTTG 7102980 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | ||| |||||||||||||| | || |||||||| || || || ||||||||||| || Sbjct 7102979 AGCCAGAATATTGACGCAAAAGAACCCGAAAAGAAGATTCCTTCCACGGCAGCAAAGGCC 7102920 Query 21620 ACTAATCGTTCACC 21633 || | ||||| || Sbjct 7102919 ACAACCCGTTCTCC 7102906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531895461045720