Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq36 89.7 5e-13 seq34 89.7 5e-13 >seq36 Length=80974255 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| |||| || ||||| || || | ||| ||||| || ||| | ||||| Sbjct 43111077 ATGATGCCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAG 43111135 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || || || || || |||||||| ||||| || | || | |||||||||||| Sbjct 43111136 TCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCA 43111195 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || |||||||| |||||| |||| | || || || ||| | Sbjct 43111196 GGTGGGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGC 43111255 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| | ||||| || | || || || || || |||||||| Sbjct 43111256 TCGACCTCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| || || ||||||||||| | ||||| || || |||||||||||| Sbjct 47887884 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 47887825 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | | ||||||||| || ||||| || ||||| || ||| || ||| Sbjct 47887824 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 47887765 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || ||| ||| | || | ||| | ||| || ||||| || ||| Sbjct 47887764 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTT 47887705 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 47887704 TTCACGAAGATCTGCAT 47887688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008062171520