Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq19 100 2e-16 seq34 96.9 3e-15 seq33 95.1 1e-14 seq36 93.3 3e-14 >seq1 Length=122647182 Score = 104 bits (114), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 16719 GCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGG 16778 ||| ||| |||| ||||| ||||||||||| || ||||||||||||| || ||| | Sbjct 14843728 GCCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT----G 14843783 Query 16779 CGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCC 16834 ||||| |||| |||||||| ||| | || | || ||| ||||| || | |||| Sbjct 14843784 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 14843843 Query 16835 TCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACG 16894 ||||| || || | | || || | | | ||||| | ||||||| |||| | Sbjct 14843844 TCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGG 14843903 Query 16895 GTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||| || || |||| || || || || |||||||| Sbjct 14843904 GTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq19 Length=38964370 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || ||| | || Sbjct 5007387 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007328 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| |||||||| ||| | || | || ||| ||||| || | |||||| ||||| Sbjct 5007327 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007268 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | ||| || | | | ||||| | ||||||| |||| |||||||| Sbjct 5007267 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 5007208 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || |||| || || || || ||||||||| Sbjct 5007207 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq34 Length=88915096 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||| || || |||||||| || | | || | | || |||| || Sbjct 47887890 TGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGC 47887831 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || |||| ||| ||||| || | ||||||||| || || || Sbjct 47887830 TTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTG 47887771 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | ||||| | ||||||| |||| ||||||||| || |||| Sbjct 47887770 GC--CTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGG 47887713 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| ||||| || || |||||||||||| Sbjct 47887712 TCAGGGTTTTCACGAAGATCTGCATTTTG 47887684 >seq33 Length=88276357 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| ||||| ||||| || ||||||||||||| | ||| | || Sbjct 13711219 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGTAGGGTGCGCCCATC 13711160 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| |||||||| ||| | || | || ||| |||| || || | ||||||||| || Sbjct 13711159 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGT-CAGGGGGATGCCCTCTTTTTC 13711101 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 || | | || || | | | ||||| | ||||||| |||| |||||||| Sbjct 13711100 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 13711041 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || |||| || || ||||| ||||||||| Sbjct 13711040 CTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq36 Length=80974255 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| |||| |||||||| || || || |||||||| | | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGAC 43111141 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | |||||||||||| |||| || ||||| ||||| || Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | ||||| | |||||| Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCT--TTGACATTTTCAGTGGTGTCACTGGGCTCGA 43111259 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| ||||| || |||| || || ||||| |||||||| Sbjct 43111260 CCTCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084035580970