Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq25 104 2e-17 seq39 84.2 1e-11 seq19 84.2 1e-11 >seq25 Length=39895028 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 103310 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 103251 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 103250 GCCGGTATTTAGCCTTA 103234 >seq39 Length=123855249 Score = 84.2 bits (92), Expect = 1e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||| ||||| |||||||||||| ||||| |||| |||| ||| | || Sbjct 84732070 CAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACGGCCATC 84732011 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || |||||||| || | || ||||| | |||| ||||| || || Sbjct 84732010 CTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCCTTCCTTATC 84731951 Query 38225 CATAATTTT 38233 || ||| || Sbjct 84731950 CAGAATCTT 84731942 >seq19 Length=38964370 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| || |||||| |||||| || || ||||| || |||| || | || || Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||| |||||||| || | | || || || | ||||| ||| || |||||| Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || |||| || || || | || || || | || || || ||| Sbjct 5007264 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTA 5007205 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||||||| |||||||| |||||||| Sbjct 5007204 CCCGTCAAGGTCTTCACGAAGATCTGCAT 5007176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943922018293