Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq39 107 2e-18 seq9 96.9 4e-15 >seq39 Length=123855249 Score = 107 bits (118), Expect = 2e-18 Identities = 186/269 (69%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| | || | || ||| ||||| ||||| ||||||| | ||| || || || || Sbjct 94436537 ATCCAATGCAAGGTCCGATCTGCTTTCTTCTTTATACAAGACATTGTCTCAATGGCATTG 94436478 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || || | || | || | |||||| || || || | || | || |||||| Sbjct 94436477 AAGAGAAATTCCCTTTCTTTAGAATCTTCAATATAAGTGACAATGAGGAGGCTATACATC 94436418 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 ||||| | || || |||| ||||||||||||| |||||||| ||||| | ||| Sbjct 94436417 TCAGAGTTGATGTTTTCCACGACAATTTGGAATCCATAGAAACAGAGGGCTTCTATAATC 94436358 Query 93452 TGCACTTCTTGAGAAAATCTCTCTA-CGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || |||||||| ||| | ||| | | || | | | || ||||| ||||| ||| | Sbjct 94436357 TGAACTTCTTGGATAAACCACTCCACCAAGTTATCCTTTTACTATGCCATCACTTGCCAC 94436298 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAAT 93539 ||| |||||||| ||||| |||||||| Sbjct 94436297 AAAGAAAGCCAAAATATGGGGTATAAAAT 94436269 >seq9 Length=64259867 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| || || | || || | ||| || |||||||||||||| |||||||| ||| Sbjct 7103021 TCATTGGAAAACGTGAGGCCAGGCATCAGGCCCCGTTTCTTGAGCCAGAATATTGACGCA 7102962 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||| ||||| || || ||||||||||| ||||| ||||||| ||||| Sbjct 7102961 AAAGAACCCGAAAAGAAGATTCCTTCCACGGCAGCAAAGGCCACAACCCGTTC 7102909 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| || || || || || | ||| |||||| ||||| |||| || ||||| Sbjct 7100818 GAATCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAGTGGATGTTTTCCATG 7100759 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 ||||||||||| || |||||||| | |||||||| ||||| |||||||| Sbjct 7100758 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCCGTAATCTGAACTTCTTG 7100709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855210509720