Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19 170 4e-37 seq33 156 8e-33 seq34 150 3e-31 seq1 149 1e-30 seq14 129 1e-24 seq36 127 4e-24 seq38 100 5e-16 >seq19 Length=38964370 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || |||||||| || |||||||| || ||||| || || | | Sbjct 5007393 AGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 5007334 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| || ||||| || || | || || ||||| || || ||||| ||| Sbjct 5007333 CCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 5007274 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||||||| |||||||||||| | || || |||| ||| Sbjct 5007273 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTG 5007214 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || ||||| | |||||| ||||| ||||||||| Sbjct 5007213 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq33 Length=88276357 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68231 ATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC 68290 ||| || || | ||||| | |||| ||| || || ||||| || |||||||| || || Sbjct 13711009 ATTCCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTC 13710950 Query 68291 GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGG 68350 ||| || || | ||||||||| | ||| || | ||| || || | || || ||||| || Sbjct 13710949 GGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGG 13710890 Query 68351 TGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC 68410 || |||||||||||||| || |||||||||||||| |||||||||||| | || Sbjct 13710889 GGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTC 13710830 Query 68411 TACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||| || ||||| || || || | |||||| ||||| |||||||| Sbjct 13710829 CACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 Score = 138 bits (152), Expect = 2e-27 Identities = 168/228 (74%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||||| |||||||| || ||||| || || |||||||| || |||| Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | ||| || ||||| || || | || || ||||| || ||| Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 13711114 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||| || || ||||| ||||| | ||||| |||||||||||| | || || Sbjct 13711113 -TGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711055 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| |||||||| || || || | |||||| || || ||||||||| Sbjct 13711054 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq34 Length=88915096 Score = 150 bits (166), Expect = 3e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314 || ||| || || |||||||| |||||||| ||||| || || || | |||||||| | Sbjct 47887894 CAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAG 47887835 Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 |||||| || || || ||||| || || ||||| || || ||||| || || || || || Sbjct 47887834 CTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGAT 47887775 Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434 ||| ||||| ||| ||||||||||| | || || |||| ||||||||| || || Sbjct 47887774 CTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 47887715 Query 68435 CGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || ||||| || ||||| ||||||||| || Sbjct 47887714 GGTCAGGGTTTTCACGAAGATCTGCATTTTG 47887684 >seq1 Length=122647182 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| |||||||| || |||||||| || |||||||| || ||||| || || | ||| Sbjct 14843730 CGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 14843789 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| | ||| || ||||| || || | || || ||||| || || ||||| || || Sbjct 14843790 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTT 14843849 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 ||||| ||||| | ||||| |||||||||||| | || || |||| ||||||| Sbjct 14843850 TCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | |||||| ||||| |||||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 Score = 123 bits (136), Expect = 5e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 68269 ACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGA 68328 ||||||| |||||||| ||||| || || || | |||||||| | || ||| || || | Sbjct 93586481 ACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTTCTTGCCTGCAA 93586540 Query 68329 ATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGG 68388 | ||||| || || ||||| || || |||||| | || ||||| ||||| | ||| || Sbjct 93586541 AGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGGTCTTCACAT 93586600 Query 68389 CCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGA 68448 ||| ||||||| | || || |||| ||||||||| || | | |||||||| | Sbjct 93586601 TTTCGTTGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTATTGCAGGCCAGGGTCTTCA 93586660 Query 68449 CGAATATCTGCAT 68461 |||||||||||| Sbjct 93586661 TGAATATCTGCAT 93586673 >seq14 Length=50855280 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| || || || |||||||| |||||||| | ||| || || || |||||||| Sbjct 29349319 ACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCATCTTCC 29349260 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||| || || ||||| || || ||||| || || || || Sbjct 29349259 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGG 29349200 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || ||||||||||| | || || |||| | ||||||| || Sbjct 29349199 ATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCCACCTCCAGGATGATGGTCTTG 29349140 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| ||||| |||||||| Sbjct 29349139 CTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 >seq36 Length=80974255 Score = 127 bits (140), Expect = 4e-24 Identities = 165/227 (73%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| | ||||||||||| | ||| || || || || Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCT-GATATTGTAGTCTGAC 43111141 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||||| ||| || || || || || || | || ||||| ||||| Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| || || || ||||| || ||||||| | || || Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111261 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| ||||| ||| | |||||||| || || |||||||| Sbjct 43111262 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq38 Length=61073796 Score = 100 bits (110), Expect = 5e-16 Identities = 157/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 ||||| | | |||||||| || ||||||||||| ||||| || | || || || || Sbjct 1878610 GAAGGTGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGCAGTCTGACAGAGTGT 1878669 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 |||||||| | ||| | || | || || || || |||| || | || |||| Sbjct 1878670 AGCCATCTTCCAGCTGTTCGCCTGAAAAAATCAGATGCTGCGGGTCAGGCAGGAT-CCTT 1878728 Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAG 68420 |||| ||||| || || || ||||| ||| |||||||| | ||| || || |||| | Sbjct 1878729 CCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCAG-TGAGATCGACCTCCAGG 1878787 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| ||||| || ||||||| |||| | |||||| Sbjct 1878788 GGGATGGTCTTTCCTGTCTGGGTCTTCTCGAAGACCTGCAT 1878828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921613149215160