Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq33 89.7 5e-13 seq1 86.0 6e-12 seq14 82.4 8e-11 >seq33 Length=88276357 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || | | || || || ||||| | || Sbjct 13710974 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGG 13710915 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| | | ||| ||||| || || || ||||| ||||| ||| ||| || | Sbjct 13710914 CAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGA 13710855 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | | ||||||||| | || | || |||||||||| || | Sbjct 13710854 CATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCT 13710795 Query 138599 TTACAAAAATCTGCATG 138615 | || || ||||||||| Sbjct 13710794 TCACGAAGATCTGCATG 13710778 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| |||| || || || | | || ||||| || |||||||||||| Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || || ||||| |||| | |||| | | ||| ||||| || || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGG 13711115 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || ||||| || ||| || ||| | | || | |||||| | | ||||||| Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711055 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||||| || || ||||| |||||||| Sbjct 13711054 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 >seq1 Length=122647182 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || || || || ||||| |||| | Sbjct 14843751 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGTTTGCCGGCA 14843810 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| ||||| || || || || ||||| || ||| || ||| | Sbjct 14843811 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCTTTGACA 14843870 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||||||||| | || | || |||||||||| || || Sbjct 14843871 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTC 14843930 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 14843931 ACGAAGATCTGCATG 14843945 >seq14 Length=50855280 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| || || || | ||| |||||||||||||| || ||||| || ||||| ||| Sbjct 26617813 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAAGTTCTGCTGGTTG 26617754 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 ||||| ||||| || | |||||| ||||||||||||| Sbjct 26617753 CTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 26617716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257418766160