Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq36 109 5e-19 seq19 98.7 9e-16 seq34 95.1 1e-14 >seq36 Length=80974255 Score = 109 bits (120), Expect = 5e-19 Identities = 161/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || |||||||| ||| ||||||| || | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGAC 43111141 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| ||||||||||| || || | |||| |||||||| || || || Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||| ||||| |||||| |||| | ||| |||||| | |||||| Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111261 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | |||||||| |||| || || ||||| |||||||| Sbjct 43111262 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq19 Length=38964370 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| || ||||| ||| || |||||||| || Sbjct 5007372 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCG 5007313 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | |||||| || || || ||||||||||||||| ||| ||| |||| Sbjct 5007312 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 5007253 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | || | || || || |||| || Sbjct 5007252 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTACCCGTCAAGGTC 5007193 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 5007192 TTCACGAAGATCTGCAT 5007176 >seq34 Length=88915096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || ||||| || || Sbjct 47887884 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 47887825 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || |||||||| || ||| ||| || ||| Sbjct 47887824 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 47887765 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||||| |||||| | ||| || || | ||| | || ||||||||||| ||| Sbjct 47887764 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTT 47887705 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 47887704 TTCACGAAGATCTGCAT 47887688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475496027160720