Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq36 163 4e-35 seq38 100 4e-16 >seq36 Length=80974255 Score = 163 bits (180), Expect = 4e-35 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 8891 AACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATG 8950 || ||||| |||||||| || || ||||| ||||| || | || || || | ||| Sbjct 19669707 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669766 Query 8951 TCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACG 9010 | || ||||| || || || |||||||| || |||||||| | || || |||||| Sbjct 19669767 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669826 Query 9011 TTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAG 9070 || |||| || ||||||||||| || || || |||| || | ||| ||||||| ||| Sbjct 19669827 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19669886 Query 9071 ATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACG 9130 |||||| | ||||| || ||||| || | || | ||| || || || | || || | Sbjct 19669887 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19669946 Query 9131 TCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || ||||| ||||| |||||| | ||||| || |||||||| ||| Sbjct 19669947 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCT 19669991 Score = 138 bits (152), Expect = 2e-27 Identities = 139/178 (78%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| ||||||||| | |||||||| ||||||||| ||| ||| | || Sbjct 19672212 TCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 19672271 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 |||||| || |||||||| || | || || || ||||||| |||||||| |||||||| Sbjct 19672272 AAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGATC 19672331 Query 10241 GGGGATAAAGGTCCTCCGAATAA-AAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 || || || | || || | || ||||||| |||||||||| | ||||||| || || Sbjct 19672332 AGGAATGAACTTTCTTCGCAGAAGAAACTTT-TCCACAATCTCTTTTGAATCAGGAAG 19672388 Score = 105 bits (116), Expect = 1e-17 Identities = 196/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || ||||| || || |||| ||||| || || |||| | || || | | | || Sbjct 19670640 CCAGCAATTTGCCTGCTGAATGATTCCACAAACTGGGTAAGGCCATGTTCCAATAATATA 19670699 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| | || |||| | || |||| | ||| |||| | || ||| Sbjct 19670700 GAGTTGTTGTAGATAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGCAAGGTGTCA 19670759 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| ||||||| || || ||||| || || || ||||| |||||| Sbjct 19670760 GGCAGGAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATGCGGTTTTGGTAC 19670819 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | |||| |||||| || || | Sbjct 19670820 TGGAATTGTTGGTT--GAAAAGCAGCTCTGGGTCAAACTTCAGCTTGAAGTGATARCCAC 19670877 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | || || ||||| | | || | ||| ||||||||||| || Sbjct 19670878 TCAAGTGTTGTACATAGTCTTCAATCACAATCTTAATGGTTTCTCC 19670923 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | || || || |||||| ||| || || || |||| ||| ||| Sbjct 19672810 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGGTACAGGGGGAAGAGCTCTGGTA 19672869 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || ||||| ||||||||||| || ||||| || | | || || Sbjct 19672870 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTTCACATTATAAGTT 19672929 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || ||||| ||||||| | |||| |||| Sbjct 19672930 GGTGGACTCTCAATCAAATGTGACCGGGCT 19672959 >seq38 Length=61073796 Score = 100 bits (110), Expect = 4e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 8963 TCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGC 9022 || || ||||| ||||| || ||||||||| | || || |||||| ||| | | ||| Sbjct 60195871 TCACCACCGAATGTGCTCGGCTTCCAGTACTCTGGAGAACAGATGGGATTCCCTAGGAGG 60195930 Query 9023 CCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGA 9082 || || | ||| || |||||||| | || || || ||||| || ||||||| ||| Sbjct 60195931 CCCTTAAGGGAGAAGGGAGCCCCAATTTCTATCATACTCTCTCCAAAGATGGAGTTTGGA 60195990 Query 9083 CGCGGTTTTTCGACGATGAAGCCA-GTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAG 9141 | || || | || | |||| | ||||| ||| | || || | ||| ||||| || Sbjct 60195991 TGGCACTTCTCCA-GAAGCAGCCCCGGGTAGAATTCCAAGGCATCAATGTCTCCATACAG 60196049 Query 9142 GGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 | ||||||||||| || ||||||||||| ||| Sbjct 60196050 CTCCTCCAACTCGGCTGCCATCTCCTTCTCCCCT 60196083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723720735580200