Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq19 149 7e-31 seq1 118 1e-21 seq33 116 4e-21 seq34 114 1e-20 seq36 98.7 1e-15 >seq19 Length=38964370 Score = 149 bits (164), Expect = 7e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || |||||| ||||| ||||||||||| || |||||| | || || Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| |||||||| || ||||| | ||||||||| | || | || |||||||||| | Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| || | | ||||| || | ||||| |||| |||||||| || Sbjct 5007264 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTA 5007205 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||||| || || || ||||| |||||| Sbjct 5007204 CCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq1 Length=122647182 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||| |||| || |||||| ||||| ||||||||||| || ||||| | Sbjct 14843730 CGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 14843789 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||| |||||||| || ||||| | ||||||||| | || | || ||| || Sbjct 14843790 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTT 14843849 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || ||||||| |||| || | | ||||| || | ||||| |||| |||||| Sbjct 14843850 TCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || |||| || || || ||||| ||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq33 Length=88276357 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || |||||| ||||| ||||||||||| || |||| | | || || Sbjct 13710987 ACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCC 13710928 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| |||| ||| || ||||| | ||||||||| | || | || ||||||||| | Sbjct 13710927 AGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGG 13710868 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| || | | ||||| | | ||||| |||| || ||||| || Sbjct 13710867 ATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTA 13710808 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||| ||||| Sbjct 13710807 CCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 >seq34 Length=88915096 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||| || || |||||||| | || || ||||||||||| || || Sbjct 47887879 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 47887820 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | || ||| || ||| |||||| ||| | | Sbjct 47887819 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 47887760 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || | ||||| |||| |||||||| ||||| ||||| ||||| || Sbjct 47887759 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCAC 47887700 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||||||| Sbjct 47887699 GAAGATCTGCATTTTG 47887684 >seq36 Length=80974255 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | || | ||||| ||||| || ||| || || ||||||||||| | Sbjct 43111081 TGCCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTG 43111139 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| || | || || ||||| ||||| || || |||| ||||||||||| | | Sbjct 43111140 ACAGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTG 43111199 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||| ||||| ||| || |||| | | ||||| || | || | Sbjct 43111200 GGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGA 43111259 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||| ||||||||| |||| || || |||||||| ||||| Sbjct 43111260 CCTCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565232726419560