Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq19 129 1e-24 seq35 123 6e-23 seq1 118 2e-21 seq36 111 3e-19 seq38 95.1 3e-14 >seq19 Length=38964370 Score = 129 bits (142), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| |||| || || | ||||||||| Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| | | || ||||| || || ||||| || ||||| || Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||||||||| |||||||| ||| ||||| || || || | ||| Sbjct 5007264 ATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATGGTC 5007208 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || ||||| || || ||||| | |||||| Sbjct 5007207 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq35 Length=77559626 Score = 123 bits (136), Expect = 6e-23 Identities = 158/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||| ||||| |||||||| || || |||||||| | |||||| | |||||||| Sbjct 46120172 ACAAGGTAGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCC 46120231 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||||||||| | ||| || | || ||||| || || |||| ||||| || || Sbjct 46120232 AGCTGCTTACCTGCAACGATGAGCCTCTGCTGGTCAGG-GGGGTGCCCTCTTTATCCTGG 46120290 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| || || ||||||||||| ||| ||||| || ||||||| ||| Sbjct 46120291 ATCTTGGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTAATGGTC 46120347 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTTA 195143 || | |||| || || | ||| | ||||| || Sbjct 46120348 TTGCAGGTCAGGGTCTTCAGGAAGATCTGCATATA 46120382 >seq1 Length=122647182 Score = 118 bits (130), Expect = 2e-21 Identities = 151/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || || || ||||| |||| || || | |||||||| ||||| Sbjct 14843741 GTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTG 14843800 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | | || ||||| || || ||||| ||||| ||||| || || Sbjct 14843801 TTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGGATCTT 14843860 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||||| ||||| |||||||| ||| ||||| || ||||| | ||||| || Sbjct 14843861 CCCTTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTACC 14843917 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || ||||| | ||||| Sbjct 14843918 AGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq36 Length=80974255 Score = 111 bits (122), Expect = 3e-19 Identities = 146/200 (73%), Gaps = 7/200 (4%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||||||||| ||| ||||||| || | ||||||| |||||||| ||||| || || Sbjct 43111113 GTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCC 43111171 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || || || || || || ||||| || || ||||| ||||||||||| ||||| ||| Sbjct 43111172 GCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGATTTTGGCTTTG 43111231 Query 195064 ACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120 || || ||| ||||||| ||| || || |||||||| | || || || ||| Sbjct 43111232 ACATTTTCAGTGGTGTC---ACTGGGCTCGACCTCAAGGGTGATAGTTTTGCCCATCAGG 43111288 Query 195121 GTTTTTACGAACACTTGCAT 195140 || || || || | ||||| Sbjct 43111289 GTCTTCACAAAGATCTGCAT 43111308 >seq38 Length=61073796 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| || |||||| | || | ||||| |||||||| ||||| Sbjct 1878626 GTGCAGGGTGGACTCTTTCTGGATATTGCAGTCTGACAGAGTGTAGCCATCTTCCAGCTG 1878685 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 | |||| || || || | || |||| || | || ||||| || ||||| ||||| Sbjct 1878686 TTCGCCTGAAAAAATCAGATGCTGCGGGTCAGGCAGGAT-CCTTCCTTATCTTGGATTTT 1878744 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| |||||||||||||| | || || || |||| | ||||||||||| Sbjct 1878745 GGCTTTGACATTCTCAATGGTGTCAGTGAGATCGACCTCCAGGGGGATGGTCTTTCCTGT 1878804 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || |||| || ||||| Sbjct 1878805 CTGGGTCTTCTCGAAGACCTGCAT 1878828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109470185167901