Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq33 120 2e-22 seq1 114 8e-21 seq19 111 1e-19 seq36 107 1e-18 seq34 93.3 3e-14 >seq33 Length=88276357 Score = 120 bits (132), Expect = 2e-22 Identities = 166/229 (72%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| | ||| ||| ||||| ||||| ||||| | Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| ||||||||||| |||||||| || | | |||||||| | || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTC-AGGGGG 13711115 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||| || || |||||| |||||| || || || | |||| || ||| | Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 13711057 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || || | |||||||||||||||||||| Sbjct 13711056 CCTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | | |||| ||||||||||| | |||||| Sbjct 13710969 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAG 13710910 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | || |||||||| ||||| ||||| || Sbjct 13710909 ATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGAC--AT 13710852 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | ||| || ||| || || | || ||||| || || || | ||||||| Sbjct 13710851 TCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCA 13710792 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 13710791 CGAAGATCTGCAT 13710779 >seq1 Length=122647182 Score = 114 bits (126), Expect = 8e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || ||| | ||| |||| ||| Sbjct 14843736 ACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 14843795 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | ||||| || || Sbjct 14843796 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGG 14843855 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| |||||| || || || | |||| || ||| || || | ||| ||||| | Sbjct 14843856 ATCTTCCCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCT 14843913 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || | |||||||| ||||||||||| Sbjct 14843914 TACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq19 Length=38964370 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| ||| Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | ||||||||||| Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || || | || ||||| || Sbjct 5007264 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTA 5007205 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | |||||||| ||||||||||| Sbjct 5007204 CCCGTCAAGGTCTTCACGAAGATCTGCAT 5007176 >seq36 Length=80974255 Score = 107 bits (118), Expect = 1e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||||||||| | || ||||| || || |||| |||| || Sbjct 43111101 ACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCATCTTCT 43111159 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || || || |||||||| | || | ||||| ||||| Sbjct 43111160 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGG 43111219 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | | | | |||| || ||| || || | ||| || ||||| Sbjct 43111220 ATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTG 43111279 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| | || |||||||||||||||||||| Sbjct 43111280 CCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || || ||||| | || |||| |||||||| || || ||||| Sbjct 47887878 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 47887819 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||| || || ||||| || ||| | Sbjct 47887818 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTT 47887759 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| || || | ||| ||||| || || || || || ||||| Sbjct 47887758 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACG 47887699 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 47887698 AAGATCTGCATTTT 47887685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630422952984