Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq36 143 2e-29 >seq36 Length=80974255 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 67495233 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 67495174 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || ||||||||||| || ||||||||||| ||||| || || ||||| |||| | Sbjct 67495173 ACGCCCAGCCCCATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACC 67495114 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 || || ||||| || | || ||||||||||| || ||||| || Sbjct 67495113 ACATAGAACTGGCAGAGGGCATGGCACGGAGGTAGGGCCATCAG 67495070 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 30158 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30217 |||| ||||| || |||||||||||||| || || || | || || | || || |||| Sbjct 67492712 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTT 67492653 Query 30218 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30277 | | || |||| ||| ||||||||||||||| || || ||||| |||||||| | Sbjct 67492652 CTCGGTTGGCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTT 67492593 Query 30278 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 | || ||| | || || || || | ||||||||| || Sbjct 67492592 TCACTCCCCTGGAAGACAGTTCCTTAGCGTTTGTGGATCC 67492553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408613601038319