Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq33 127 2e-24 seq1 118 1e-21 seq36 113 4e-20 seq19 107 2e-18 seq34 86.0 6e-12 >seq33 Length=88276357 Score = 127 bits (140), Expect = 2e-24 Identities = 165/227 (73%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 13711008 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAGT 13711067 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| ||||| || || || || || || Sbjct 13711068 GACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCC-CCTGACCAG 13711126 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | | | | || || ||| Sbjct 13711127 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTACCCGACTACAAC 13711186 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || |||||||| |||| ||| | ||||| Sbjct 13711187 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 13711233 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || ||||| || || || || ||| Sbjct 13710779 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTGGAGGTGGAGCCCAAT 13710838 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || || || Sbjct 13710839 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 13710898 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||| | ||||||||||| ||| | | | | |||| || || ||| Sbjct 13710899 CAGAGGTTGATCTTTGCCAGCAAACAGCTGGAAGATGGGTGCACCCTGTCCGACTACAAC 13710958 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 13710959 ATCCAGAAGGAGTCAACTCTGCACCTGGT 13710987 >seq1 Length=122647182 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 14843944 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 14843885 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| ||||| || || || || || || Sbjct 14843884 GACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCAG 14843825 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | |||| || || ||| Sbjct 14843824 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 14843765 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || |||||||| |||| Sbjct 14843764 ATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCG 14843730 >seq36 Length=80974255 Score = 113 bits (124), Expect = 4e-20 Identities = 163/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || | || |||||||| || || || || || ||| Sbjct 43111309 GATGCAGATCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAG 43111250 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| |||| || ||| || |||||||||||||| || || || || || || Sbjct 43111249 TGACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCA 43111190 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| ||||| || |||||||| || ||| ||| ||||||| || || Sbjct 43111189 GCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAA 43111130 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | ||| || || || || | ||||||||| | || |||| || ||| Sbjct 43111129 TA-TCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGC 43111082 >seq19 Length=38964370 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || | || ||||| || || || || || || || || Sbjct 5007173 ACAATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACTCTGGAGGTGGAGCCC 5007232 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || || || || Sbjct 5007233 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 5007292 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||| ||||||||||| ||| | | | | |||| || || Sbjct 5007293 CAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTAC 5007352 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || || ||| |||| Sbjct 5007353 AACATCCAGAAGGAGTCCACTCTGCACCTGGT 5007384 >seq34 Length=88915096 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| || || || || || || || || ||| Sbjct 47887688 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 47887747 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| || ||||| || || || || || || Sbjct 47887748 GACACCATCGAAAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 47887807 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 47887808 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 47887867 Query 24884 ATTCAAAAGGAATCGACACTACACTTG 24910 || || || || || || || ||| || Sbjct 47887868 ATCCAGAAAGAGTCAACTCTCCACCTG 47887894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893084152840