Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq33 134 9e-27 seq19 134 9e-27 seq1 123 2e-23 seq36 109 4e-19 seq34 95.1 8e-15 seq14 86.0 4e-12 >seq33 Length=88276357 Score = 134 bits (148), Expect = 9e-27 Identities = 169/229 (74%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||||| ||| | ||| |||||||| ||||| ||||| | | Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| || || ||||| ||||||| | |||||||| | || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTC-AGGGGG 13711115 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||| || || | || || |||||| || || || | ||| ||| ||| | Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 13711057 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| || || | |||||| |||||||||||||| Sbjct 13711056 CCTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 Score = 125 bits (138), Expect = 5e-24 Identities = 170/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34746 CATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGT 34805 |||| || ||||| | | ||||||||||| | || ||||||||| ||||| |||| Sbjct 13711010 CATTCCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGT 13710951 Query 34806 CCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTT 34865 | || ||| ||| | |||| ||||| || || | ||| ||||||| | |||||||| Sbjct 13710950 CGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAG 13710891 Query 34866 GCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGC 34923 | || | || |||||||| | || ||| ||||| || || || | ||||||| Sbjct 13710890 GGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGAC--ATTCTCGATGGTGTCATTGGG 13710833 Query 34924 CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || | || |||||||| || || | |||||| || |||||||||||| Sbjct 13710832 CTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATG 13710778 >seq19 Length=38964370 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| || ||| ||||| |||| Sbjct 5007387 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007328 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | ||||||||||| Sbjct 5007327 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007268 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | || |||||| Sbjct 5007267 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 5007208 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | |||||| || ||||||||||| Sbjct 5007207 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007176 >seq1 Length=122647182 Score = 123 bits (136), Expect = 2e-23 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 || |||||||| ||| | ||| ||||||||| ||||| ||||| || ||| |||| | Sbjct 14843729 CCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCC 14843788 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| ||||| || || ||||| ||||||| | |||||||| | || | ||||| || Sbjct 14843789 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTT 14843848 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTT 34939 || | || || |||||| || || || | ||| ||| ||| || || | ||| Sbjct 14843849 TTCTTGGATCTTCCCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 14843906 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| || || | |||||| || |||||||||||| Sbjct 14843907 ATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATG 14843945 >seq36 Length=80974255 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| |||||| | || ||||| || || | || |||| Sbjct 43111098 AGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCATCT 43111156 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || || || ||||| || |||||||| | || | ||||| ||||| Sbjct 43111157 TCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCT 43111216 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | | | | ||| ||| |||||| |||| ||| || || Sbjct 43111217 TGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTT 43111276 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||| | |||||||| |||||||||||||| Sbjct 43111277 TTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| || || || || |||| |||| ||||| ||||| || || || Sbjct 47887879 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 47887820 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || | |||||||| | || | ||||| || || | || || || ||| Sbjct 47887819 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 47887760 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| ||| ||| || || | ||| |||||||| || || ||||| || || Sbjct 47887759 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCAC 47887700 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 47887699 GAAGATCTGCAT 47887688 >seq14 Length=50855280 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | || ||||||| | || ||| ||||| ||||| | || || Sbjct 29349337 CCACCCCTCAGACGGAGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAA 29349278 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || || | |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 29349277 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 29349218 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || || | | || | ||||||| ||| || Sbjct 29349217 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCCACC 29349158 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | | | |||||||| | || |||||||| || ||||||||||| Sbjct 29349157 TCCAGGATGATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689612587057