Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq33 147 2e-30 seq36 109 4e-19 seq34 95.1 9e-15 >seq33 Length=88276357 Score = 147 bits (162), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| ||||| || || |||||||| || || ||||| || || | Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | ||||| || ||||| || || || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGG 13711115 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||| ||||| | || ||||||| | || | |||||| | || || Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711055 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || || || ||||| ||||| || ||||| ||||||||| Sbjct 13711054 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq36 Length=80974255 Score = 109 bits (120), Expect = 4e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| || | ||||| ||||| ||| | || || || | | || || | Sbjct 43111095 CGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCA 43111153 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || |||||||| ||| | |||| | ||||| || || || || ||||||||| Sbjct 43111154 TCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTG 43111213 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| ||||||| |||| |||||| | || || ||||| || ||| Sbjct 43111214 TCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATA 43111273 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| | | ||| || ||||| |||||||| Sbjct 43111274 GTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| | | || | || || || || || ||||| || ||||| ||||| | | Sbjct 47887914 CCACCCCTCAGATGGAGAATCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 47887855 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || || Sbjct 47887854 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 47887795 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||| || || | || || || |||| | |||||| | || || Sbjct 47887794 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 47887735 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | |||||| || || ||||||||||| Sbjct 47887734 TCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 47887685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215430028223