Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq34 129 6e-25 seq33 118 1e-21 seq36 114 1e-20 seq14 111 2e-19 seq35 100 3e-16 seq1 100 3e-16 >seq34 Length=88915096 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 47887884 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 47887826 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 47887825 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 47887766 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 47887765 CACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 47887706 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 47887705 TTTCACGAAGATCTGCAT 47887688 >seq33 Length=88276357 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| || ||| || || || ||||| |||| Sbjct 13710975 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTG 13710916 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || ||||||||| || ||||||||||||||||| ||||||| |||| Sbjct 13710915 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTG 13710856 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | || | ||| || || |||| || Sbjct 13710855 ACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTC 13710796 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 13710795 TTCACGAAGATCTGCATG 13710778 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133456 AATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCT 133515 |||| | || ||||||||||| || |||| ||| | ||| || | |||| Sbjct 11742990 AATGGAGAGTTGACTCTTTCTGGATGTTGTTATCAGAAAGAGTGTGGCCCTCTCCCAGCT 11743049 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | ||||||| ||| | || || |||||||| || || || ||||| Sbjct 11743050 GCTTGCCTGCAAAGATGAGCCTCTGTTTTTCAGGTGGGATGCCCTCTTTATCCTGGATCT 11743109 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | || || | |||||||| || | | ||| ||| ||| | | Sbjct 11743110 TGGCCTTCACATTCTCGATGGTATCTCTAGGCTCCACCTCCAGGATGATGGTCTTGACAG 11743169 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||||| | ||| ||||||||| Sbjct 11743170 TCAGGGTTTTCATGAAGATCTGCATG 11743195 >seq36 Length=80974255 Score = 114 bits (126), Expect = 1e-20 Identities = 154/208 (74%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| |||||||| || || || | | | || || || Sbjct 43111104 AAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGACAGAGTTCGGCCA-TCTTCTAG 43111161 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||||||| |||| || ||||||||||| || |||||||| || ||||| ||| Sbjct 43111162 CTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGAT 43111221 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | ||| ||||| ||||||| || || | ||||| ||||||| Sbjct 43111222 -TTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGC 43111280 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || || || |||||||| Sbjct 43111281 CCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq14 Length=50855280 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||| ||| | ||| | | | || || ||||||||||| Sbjct 29349307 GTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCA-TCTTCCAGCTGCTTGCC 29349249 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 29349248 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 29349189 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | | ||| ||| |||| |||||| || Sbjct 29349188 CACATTTTCGATGGTGTCATTGGGCTCCACCTCCAGGATGATGGTCTTGCTGGTCAGGGT 29349129 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 29349128 CTTCACGAAGATCTGCAT 29349111 >seq35 Length=77559626 Score = 100 bits (110), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | ||| | || || |||||||| || Sbjct 46120184 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGCTTACCT 46120243 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||| ||||||||| || ||| |||| || || || |||||| ||| Sbjct 46120244 GCAACGATGAGCCTCTGCTGGTCAGG-GGGGTGCCCTCTTTATCCTGGATCTTGGCCTTC 46120302 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| |||||||||| || | ||| | ||| |||| |||||| || Sbjct 46120303 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCAGGTCAGGGTC 46120362 Query 133644 TTTACGAAAATCTGCAT 133660 || | ||| |||||||| Sbjct 46120363 TTCAGGAAGATCTGCAT 46120379 >seq1 Length=122647182 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 133468 ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCG 133526 |||||||||| || |||||||| | ||| | | | || || |||| |||||| || Sbjct 93586481 ACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCCAGCTTCTTGCCTGCA 93586539 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | ||||||| ||||||||| |||||||||||| | || || |||||| ||| | Sbjct 93586540 AAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGGTCTTCACA 93586599 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || ||||| ||||||| || || | ||||| ||| |||| || ||| || || Sbjct 93586600 TTTTCGTTGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTATTGCAGGCCAGGGTCTTC 93586659 Query 133647 ACGAAAATCTGCAT 133660 | ||| |||||||| Sbjct 93586660 ATGAATATCTGCAT 93586673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415947663720