Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq1 192 7e-44 >seq1 Length=122647182 Score = 192 bits (212), Expect = 7e-44 Identities = 604/930 (65%), Gaps = 13/930 (1%) Strand=Plus/Plus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| ||||| | |||| ||| |||| |||||||| || || | ||| || Sbjct 81958151 CCAGGGCTTTATGCCTCAGATGCTCATCTAAACACTGGATGGCAAAGAGGTCAATGTCTG 81958210 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 || |||||||| || |||| ||| ||| | | | | ||||| || | || || | Sbjct 81958211 TGTCAAACTTGTTGGCAAACAAGTGGTGCTTG--CGT-AGCATCCAGTTCAAGTCACCTG 81958267 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 |||||| || ||||| || ||||| || || || |||||||| || || |||| || | Sbjct 81958268 CTCCGAAAACACACACAGAACGCACATGGACCCCACTGCACGGTGGGTAGGGGGCACCCT 81958327 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 ||||| || || |||| ||||| || || ||||| | ||| || |||||||| | Sbjct 81958328 TAGAAACATCACCTTCAAAGTACTGCCATTTGACAAACCTTGCGATTGCATGCATGTCAG 81958387 Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | |||| ||||| | | | | || | || || || | || | ||||| | || Sbjct 81958388 ACATGTCATACTTCTGGCTTAAGGACAGCGAGCCTGGGACTTCAGGGATCCTCTGAATAG 81958447 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||| |||| || || || || || || || || | ||||||||| |||| || Sbjct 81958448 TGGCCCAGAGGTACTCATCAGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGA 81958507 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 ||| || | ||| | || || || ||| | || | ||| || || || | Sbjct 81958508 TTTTTTCATTCTTTAGCACATATTCTACATACTTCCTACTGACCACAAAATAAGCACTGC 81958567 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538 | ||||| | ||| | | ||| || || |||||| || |||||| | | Sbjct 81958568 CTGAAAATAGAGGTGTTTCAAGAGGTGGATGCATTTTGTCAGTCCCTGTGTTGGTCAGCT 81958627 Query 162539 TTCCCTCTACGACC---ACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGT 162595 |||| | || || | || ||| ||||||| | | || ||| | | Sbjct 81958628 TTCCATTAACAACTGTAAAATG---CTTTTTCCACCTTTCTTTTTTGTTGGATGGCATTC 81958684 Query 162596 GTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGAT 162655 || || ||||| |||| |||| | | || |||| || || || || | | Sbjct 81958685 TCTCAGTTTCTAGGTTGTTTTCACCCATTAGCGATTTGAGCTTCCGGACAATTTCCAAGT 81958744 Query 162656 TGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGA 162715 |||| || | ||||| || |||| || ||||| || | || ||||| | | || | Sbjct 81958745 TGGTTTTGATAGGAAAATCCATGCCACAAAGATTTATCAAGTACTTCCAGTCTGCACTCA 81958804 Query 162716 GTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACA 162775 | | || ||||| | ||||| || || ||||| || |||||||| || || || | Sbjct 81958805 TCCTATGGAGGTCCTGCATGCAGTTGAGGTCAGCCTGAACTCGACTCCATGAGGCATATA 81958864 Query 162776 CGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA 162835 | || ||||| | | | |||| || |||| || ||| || || | || || | || Sbjct 81958865 CCACACTCTCTAGCTGACTGGCCACGAAGATGTTACTGAAGCAGGACGCAATGCCAAGCA 81958924 Query 162836 CGGCCAGTGAGAAC--ATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTG 162893 |||| |||| ||| || | ||| | || ||||| | |||||| | |||||| Sbjct 81958925 CGGCAGCCAAGAAGGAATCC--TCGGATTTTTTGTCCACGTGAATGCAGTAGAAATTCTG 81958982 Query 162894 AGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGAT 162953 ||| ||||||||||||||| | || || | |||||| || || || || || || || Sbjct 81958983 AGGCATGTAGATGGCCCTCAGGAGCCTGTCAAGCATCTCAATTTTGTGATGAACTACTAT 81959042 Query 162954 AGAATACGCTATGGGGAACTCAGCCTCCTC 162983 |||||| |||||||| || || || || || Sbjct 81959043 AGAATATGCTATGGGAAATTCTGCTTCTTC 81959072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578426193988800