Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq34 102 2e-16 seq39 86.0 1e-11 seq1 86.0 1e-11 >seq34 Length=88915096 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 47887703 AAAACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 47887762 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || ||||| || || || ||| || || || ||||| Sbjct 47887763 GTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 47887822 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 47887823 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCA 47887882 Query 206365 ACTCTTCACCT 206375 ||||| ||||| Sbjct 47887883 ACTCTCCACCT 47887893 >seq39 Length=123855249 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||| || || |||||||| || || || ||||| || || || || ||| Sbjct 84731942 AAGATTCTGGATAAGGAAGGAATCCCTCCTGATCAGCAGAGACTGATATTTGCTGGCAAG 84732001 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||| ||||| | |||||| | || |||||| | || || ||||| |||| ||| Sbjct 84732002 CAACTGGAGGATGGCCGTACTTTGCCTGACTACAACATTCAAAAGGAGTCCACTCCTCAT 84732061 Query 206374 CTTGTTTTGAGACTTCG 206390 ||||| ||||||||||| Sbjct 84732062 CTTGTGTTGAGACTTCG 84732078 >seq1 Length=122647182 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||||||||| || || || ||| || || | ||||| ||||| || Sbjct 14843860 AAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGCAAA 14843801 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| ||||||||||| | || || |||| |||||| ||||||| ||||| ||||| ||| Sbjct 14843800 CAGCTGGAAGATGGACGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTGCAC 14843741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181808640910563