Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq14 100 3e-16 seq1 87.8 2e-12 seq33 86.0 6e-12 >seq14 Length=50855280 Score = 100 bits (110), Expect = 3e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | |||||||||||||||||| || |||||| || ||||| ||| Sbjct 26617813 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAAGTTCTGCTGGTTG 26617754 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||||||||||| || | |||||| ||||||||||||| Sbjct 26617753 CTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 26617716 >seq1 Length=122647182 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | ||||| || || |||||||||||| || ||| || | Sbjct 14843730 CGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 14843789 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| |||| | |||| | | ||| || || || || ||||| ||||| Sbjct 14843790 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTT 14843849 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || ||| | | || | || || | |||||||| || | || | Sbjct 14843850 TCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || |||||||||| || || | ||| ||||||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATG 14843945 >seq33 Length=88276357 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||| || ||| | | |||||| |||||||| | || Sbjct 13710974 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGG 13710915 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| | | ||| || || || || |||||||| || || || ||| || | Sbjct 13710914 CAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGA 13710855 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || || | |||||||| || | || | || |||||||||| || | Sbjct 13710854 CATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCT 13710795 Query 132108 TTATGAAAATCTGCATG 132124 | | ||| ||||||||| Sbjct 13710794 TCACGAAGATCTGCATG 13710778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606416015080