Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9 197 2e-44 seq6 176 6e-38 seq29 170 3e-36 >seq9 Length=64259867 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 59113155 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 59113102 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 59113101 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCCCGC 59113042 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| ||| ||| | | || ||||||||||| ||||||||| Sbjct 59113041 CTGGCGCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGCGC 59112982 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 59112981 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 59112933 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 59167600 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 59167547 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 59167546 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCCCGC 59167487 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| ||| ||| | | || ||||||||||| ||||||||| Sbjct 59167486 CTGGCGCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGCGC 59167427 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 59167426 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 59167378 Score = 122 bits (134), Expect = 1e-21 Identities = 100/122 (82%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080 ||||||| |||||||||| | |||||||||| ||| ||| | | || |||||||| Sbjct 59140436 CGAGGCCTCCCGCCTGGCGCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCA 59140495 Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| |||||||||||| | ||| |||||| ||||||| ||||||||| ||||||||||| Sbjct 59140496 GACGGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 59140555 Query 725141 CA 725142 || Sbjct 59140556 CA 59140557 Score = 93.3 bits (102), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 725057 CACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGC 725116 ||| ||| | | || ||||||||||| |||||||||||| | ||| |||||| ||||| Sbjct 59148744 CACCATCACCTCCCGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGC 59148685 Query 725117 CAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||||||||| ||||||||||||| Sbjct 59148684 CAAGCACGCCGTGTCCGAGGGCACCA 59148659 >seq6 Length=60963907 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||||||||| |||| |||| || |||| ||||| Sbjct 601354 TACAAGGTGCTGAAGCAGGTGCACCCAGACACCGG-----CATC-TCGTCCAAGGCCATG 601301 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| | || ||||||| || ||||||| ||| Sbjct 601300 GGCATCATGAACTCGTTCGTCAACGACATCTTTGAGCGCATCGCCAGCGAGGCCTCCCGC 601241 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | |||||| | ||||| ||||||||| Sbjct 601240 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGCGC 601181 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || ||||||||||||| Sbjct 601180 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 601132 >seq29 Length=26524611 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 24001103 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 24001050 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 24001049 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 24000990 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 24000989 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 24000930 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24000929 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24000881 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 24178729 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 24178782 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 24178783 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 24178842 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 24178843 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 24178902 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24178903 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24178951 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 25031060 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 25031113 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 25031114 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 25031173 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 25031174 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 25031233 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 25031234 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 25031282 Score = 168 bits (186), Expect = 1e-35 Identities = 177/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||| |||||||| ||||||||||||||| || | |||| || |||| || Sbjct 23690634 ATCTATAAGGTGCTGAAGCAGGTGCACCCCGACACNGG-----CATC-TCGTCCAAGGCC 23690581 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||||||||| ||||||||||| |||| ||||||| |||||| Sbjct 23690580 ATGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCG 23690521 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| | | ||||||||||| |||||| Sbjct 23690520 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTG 23690461 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 23690460 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 23690409 Score = 168 bits (186), Expect = 1e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 24145300 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 24145247 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||| | ||| Sbjct 24145246 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGRCGTCGCGC 24145187 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 24145186 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 24145127 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24145126 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24145078 Score = 147 bits (162), Expect = 3e-29 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| |||||||||||||| ||||||||||| |||| ||||||| ||| Sbjct 24557664 CAAGGCCATGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGA 24557605 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 ||| |||||||||| | |||||||||| || ||| | | ||||||||||| Sbjct 24557604 GGCGTCGCGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGAC 24557545 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24557544 GGCCGTGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24557486 Score = 125 bits (138), Expect = 1e-22 Identities = 122/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 724986 TCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCC 725045 ||||| ||||||||||| |||| ||||||| |||||| |||||||||| | | Sbjct 24543197 TCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCATTAC 24543138 Query 725046 AACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGC 725105 ||||||||| || ||| | | ||||||||||| |||||||||||| | ||| | Sbjct 24543137 AACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCC 24543078 Query 725106 GGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||||||| ||||||||| ||||||||||||| Sbjct 24543077 GGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24543041 Score = 120 bits (132), Expect = 4e-21 Identities = 136/181 (75%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 24127355 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 24127408 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 24127409 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 24127468 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | | ||||||||||| ||||||||| Sbjct 24127469 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGC 24127528 Query 725094 C 725094 | Sbjct 24127529 C 24127529 Score = 120 bits (132), Expect = 4e-21 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 724989 TTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAAC 725048 || ||||||||||| |||| ||||||| |||||| |||||||||| | |||| Sbjct 24999547 TTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCATTACAAC 24999488 Query 725049 AAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGC 725108 |||||| || ||| | | ||||||||||| |||||||||||| | ||| ||| Sbjct 24999487 AAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGG 24999428 Query 725109 GAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||||||| ||||||||| ||||||||||||| Sbjct 24999427 GAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24999394 Score = 98.7 bits (108), Expect = 1e-14 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| | | ||||||||||| |||||| Sbjct 24189257 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTG 24189316 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24189317 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24189368 Score = 87.8 bits (96), Expect = 3e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 725045 CAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCG 725104 |||||||||| || ||| | | ||||||||||| |||||||||||| | ||| Sbjct 24114988 CAACAAGCGCTCGACCATCACGTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCC 24115047 Query 725105 CGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24115048 CGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24115085 Score = 86.0 bits (94), Expect = 9e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 725073 GAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCC 725132 ||||||||||| |||||||||||| | ||| ||| || ||||||| ||||||||| ||| Sbjct 23677994 GAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCC 23678053 Query 725133 GAGGGCACCA 725142 |||||||||| Sbjct 23678054 GAGGGCACCA 23678063 Score = 86.0 bits (94), Expect = 9e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 725073 GAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCC 725132 ||||||||||| |||||||||||| | ||| ||| || ||||||| ||||||||| ||| Sbjct 24131067 GAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCC 24131008 Query 725133 GAGGGCACCA 725142 |||||||||| Sbjct 24131007 GAGGGCACCA 24130998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177733749174086