Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq19 141 8e-29 seq34 111 1e-19 seq36 96.9 3e-15 seq39 87.8 2e-12 seq14 86.0 6e-12 seq1 84.2 2e-11 seq35 82.4 7e-11 >seq19 Length=38964370 Score = 141 bits (156), Expect = 8e-29 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || |||||||| || || ||||| Sbjct 5007367 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAA 5007308 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 5007307 GATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 5007248 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || ||||||||||| || ||||| Sbjct 5007247 CTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCAC 5007188 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 5007187 GAAGATCTGCATT 5007175 >seq34 Length=88915096 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 47887879 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 47887820 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||| || ||| |||||| ||||| | Sbjct 47887819 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 47887760 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| |||||||| Sbjct 47887759 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCAC 47887700 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 47887699 GAAGATCTGCATTTTG 47887684 >seq36 Length=80974255 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || || || ||| || ||| | ||||| || | || ||||| | || || Sbjct 43111100 CACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCATCTTC 43111158 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||| || |||||||| |||| ||||||||||| | || | || ||| ||||| Sbjct 43111159 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTG 43111218 Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| || || | | || | ||||| || | || ||||| | ||||| |||| Sbjct 43111219 GAT-TTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTT 43111277 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744 | ||| ||| || |||||||| ||||||| ||| |||| Sbjct 43111278 TGCCCATCAGGGTCTTCACAAAGATCTGCA-TCTCTGCG 43111315 >seq39 Length=123855249 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| || |||||||||||||||||| || | | Sbjct 84732084 CCACCACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGC 84732025 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || |||||||||| | |||||| || | ||| Sbjct 84732024 AAAGTACGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGG 84731965 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | | ||||| |||| ||||| Sbjct 84731964 ATTCCTTCCTTATCCAGAATCTT 84731942 >seq14 Length=50855280 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||| ||| | | || | | || ||||||||||| || ||||| Sbjct 29349302 CTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAA 29349243 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||| || ||| |||||| ||||| | | Sbjct 29349242 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATT 29349183 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | | |||||||||| |||| || || | |||| || ||||| Sbjct 29349182 TTCGATGGTGTCATTGGGCTCCACCTCCAGGATGATGGTCTTGCTGGTCAGGGTCTTCAC 29349123 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 29349122 GAAGATCTGCAT 29349111 >seq1 Length=122647182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | ||| || | || ||||||| ||| || ||||| Sbjct 93586482 CTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTTCTTGCCTGCAAA 93586541 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC-TTGTCCATGATCTTTTGCTTCAGAG 35663 || | || ||||||||| | ||| | || |||| || || |||||| ||||| | Sbjct 93586542 GATGAGCCTCTGCTGGTCAGGAGGGATGC-CTCCTTTATCTTGGATCTTGGTCTTCACAT 93586600 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | ||||| || | || ||||||| ||||| || || | | || || |||| Sbjct 93586601 TTTCGTTGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTATTGCAGGCCAGGGTCTTCA 93586660 Query 35724 CAAATATCTGCAT 35736 ||||||||||| Sbjct 93586661 TGAATATCTGCAT 93586673 >seq35 Length=77559626 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || | | || |||||||||||||| |||| Sbjct 46120189 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGCTTACCTGCAAC 46120248 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || || ||| || ||| |||||| ||||| | | Sbjct 46120249 GATGAGCCTCTGCTGGTCAG-GGGGGTGCCCTCTTTATCCTGGATCTTGGCCTTCACATT 46120307 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| || || || || | |||| || |||| Sbjct 46120308 TTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCAGGTCAGGGTCTTCAG 46120367 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 46120368 GAAGATCTGCAT 46120379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450789075159240