Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq33 129 6e-25 seq1 122 9e-23 seq19 114 1e-20 seq36 86.0 6e-12 seq34 86.0 6e-12 seq37 84.2 2e-11 >seq33 Length=88276357 Score = 129 bits (142), Expect = 6e-25 Identities = 166/228 (73%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | |||| || | ||| || ||||||||||| || |||||||||||| Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||||||||| ||||| ||||| | |||||| || || || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGG 13711115 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||||||||| || || |||||| || | ||||| | ||||| Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711055 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| ||||| ||||| || || || || || || || |||||| Sbjct 13711054 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134480 TGCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTA 134539 ||| || || || ||||| || | || ||||| || || || ||||| || |||||||| Sbjct 13711012 TGCATTCCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTA 13710953 Query 134540 GTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATC 134599 |||| | |||| || || |||||||||| ||||| ||||| | |||||| || Sbjct 13710952 GTCGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTC 13710893 Query 134600 GGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGA 134659 || || |||||||| || || || || ||| ||||| || | ||||| | Sbjct 13710892 AGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGG 13710833 Query 134660 TTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||||||||| ||||| || || || || ||||| || ||||| Sbjct 13710832 CTCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 >seq1 Length=122647182 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| || | ||| || ||||| ||||| || |||||||||||| | |||| | Sbjct 14843730 CGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 14843789 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||||||||| ||||| ||||| | |||||| || || || ||||| |||||| Sbjct 14843790 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTT 14843849 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| || || |||||| || | ||||| | ||||| || || || ||| Sbjct 14843850 TCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || ||||| || ||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 >seq19 Length=38964370 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134494 TGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGT 134553 |||| || | || ||||| || ||||| ||||| || |||||||||||| | |||| Sbjct 5007395 TGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGC 5007336 Query 134554 GAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTT 134613 | || || ||||||||||| ||||| ||||| | |||||| || || || ||||| | Sbjct 5007335 GCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCT 5007276 Query 134614 CTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAG 134673 | || || || || || ||||| || | ||||| | ||||| || |||| Sbjct 5007275 CCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAG 5007216 Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | ||||| ||||| || || || || ||||| || |||||| Sbjct 5007215 TGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq36 Length=80974255 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/153 (74%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||| || || | ||| | ||| | ||||| || || ||| | |||||||| | | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGAC 43111141 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | | | || || ||||||||||| |||||||||| ||||||||| || || || Sbjct 43111142 AGAGTTCGGCCA-TCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 43111200 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| ||||| ||||| ||||| |||||| Sbjct 43111201 GATGCCCTCTTTGTCTTGGATTTTGGCTTTGAC 43111233 >seq34 Length=88915096 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || || || || || || |||||||| || || ||| | || || ||| Sbjct 47887893 AGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGC 47887834 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||||||||| || | | |||||| || || || ||||| ||||| || || || Sbjct 47887833 TGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATC 47887774 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || || | ||||| | ||||| || || || ||||| || ||| Sbjct 47887773 TTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCG 47887714 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | ||||| ||||| || ||||||||| Sbjct 47887713 GTCAGGGTTTTCACGAAGATCTGCATTTTG 47887684 >seq37 Length=74325445 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| ||||||||||||||||||||||||| | ||||||| | ||| | ||||| ||||| Sbjct 5261155 GTCCTCGAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGGCAGGCAGGATGCCCTCTTT 5261214 Query 134618 TTCTTGAATTTTTTGTTTGAC 134638 ||||| ||||| |||||| Sbjct 5261215 GTCTTGGATTTTGGCTTTGAC 5261235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393327063560