Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq36 114 1e-20 seq33 91.5 1e-13 seq34 89.7 4e-13 seq14 87.8 2e-12 >seq36 Length=80974255 Score = 114 bits (126), Expect = 1e-20 Identities = 167/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | ||||| || || || || ||||| ||| |||||||||| Sbjct 43111081 TGCCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTG 43111139 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | ||||| |||||||| || || |||| |||||||| || || || | Sbjct 43111140 ACAGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTG 43111199 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||| || ||| ||| ||| | |||| ||||| ||| || | Sbjct 43111200 GGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGA 43111259 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | || || || |||| ||||||| |||| || ||||||||||| ||||| |||| Sbjct 43111260 CCTCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCATCTCTGC 43111314 >seq33 Length=88276357 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| |||| ||||| || | || || || || || || ||||||||| Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | ||||| | ||||| |||||||| ||||| | || | | ||| || || || || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG- 13711115 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || |||||| ||| | | || | ||||| ||| || || Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711055 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || || |||| || ||||||||||| ||||| Sbjct 13711054 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 >seq34 Length=88915096 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||| || | |||| | ||||| ||||| || || Sbjct 47887884 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 47887825 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | ||| || || || || | ||||||||||| ||||||| ||| Sbjct 47887824 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 47887765 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | |||| | ||||| ||| || || || || || || | ||||| ||||| ||| Sbjct 47887764 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTT 47887705 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 47887704 TTCACGAAGATCTGCAT 47887688 >seq14 Length=50855280 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 |||||||| ||| || ||||| ||||| |||||||||||||| ||||| ||||| Sbjct 26621393 GCCAGGTCACAGCTGGCCTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 26621334 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 | | | | |||| ||||| ||||| | |||| | ||||||||| ||||| ||| Sbjct 26621333 AGTAGCTGGGCTTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAGA 26621274 Query 131150 CCCTGTATCCCAA 131162 || |||| ||||| Sbjct 26621273 CCTTGTACCCCAA 26621261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930241352936