Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq36 165 7e-36 seq9 87.8 2e-12 >seq36 Length=80974255 Score = 165 bits (182), Expect = 7e-36 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||||||||| || || |||||||| |||||||||| ||||| || | ||| Sbjct 67495061 GATCTTCCTCTGATGGCCCTACCTCCGTGCCATGCCCTCTGCCAGTTCTATGTGGTGAAC 67495120 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || |||||||||||| | || ||||| ||| Sbjct 67495121 GGTGAGCTGTCCTGCCAGCTATACCAGAGGTCAGGAGACATGGGGCTGGGCGTGCCCTTC 67495180 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 67495181 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 67495221 Score = 165 bits (182), Expect = 7e-36 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| || | |||| Sbjct 67495221 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACGCCCAGCCCC 67495162 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || | || || ||||||||||||||||| || ||| | || ||||| ||| Sbjct 67495161 ATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGG 67495102 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||||| || || ||||||||||| ||||| Sbjct 67495101 CAGAGGGCATGGCACGGAGGTAGGGCCATCAGAGGAAGATC 67495061 Score = 105 bits (116), Expect = 6e-18 Identities = 118/155 (76%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| ||| | ||||| || || ||| |||| ||||| |||||||| || | ||||||| Sbjct 67492557 CCACAAACGCTAAGGAACTGTCTTCCAGGGGAGTGAAAATCTGGGATGCCAATGGGTCTC 67492616 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411 |||||||| |||||| | ||| ||| ||| | || || || || || || ||||| | Sbjct 67492617 GAGACTTTTTGGACAGCCTGGGATTCGCCAAC-CGAGAAGAAGGGGATTTAGGCCCAATT 67492675 Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || || |||||||| || |||||||| || || Sbjct 67492676 TATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 67492710 Score = 105 bits (116), Expect = 6e-18 Identities = 118/155 (76%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || | ||||| || || || || || Sbjct 67492710 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTTCT 67492651 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 || | ||| ||| ||| | |||||| ||||||||||||||| | || |||||||| || Sbjct 67492650 CG-GTTGGCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTTT 67492592 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 ||| |||| ||| || || ||||| | ||| |||| Sbjct 67492591 CACTCCCCTGGAAGACAGTTCCTTAGCGTTTGTGG 67492557 >seq9 Length=64259867 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/279 (67%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 34529 GACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCC 34588 || ||||| | | | |||| | ||||| || |||||||| ||||| | ||| || Sbjct 59026338 GAAAGAAGAACCATCCTGTGTGGTTGGAATCCAAAGGATCTTCCTCTTAAGGCCCTATGT 59026397 Query 34589 CCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTAT 34648 || ||||| ||| ||||| ||||| | |||| ||||||||||||||| | || Sbjct 59026398 CCCTGCCATGACCTTTGCCAGTTCTATG-----AATGATGAGCTGTCCTGCCAGTTGTAC 59026452 Query 34649 CAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC----GCTCT 34704 || | || |||||| || | || ||||| |||||||| | || ||| || | Sbjct 59026453 CACAGGTCACAAGACATAGGCCTGGGTGTGCCCCTCAACATTACCAGCTACACAGGCCTT 59026512 Query 34705 GCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTT 34764 |||| | ||||||| ||| || || || || || || | | || ||| || Sbjct 59026513 GCTCGCCTACATGACCGCACACATCACAGGCCTGAAGCCAGGTAACTTTGTAGGTACTTT 59026572 Query 34765 GGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCT 34803 | ||||| ||||| ||||| || ||| | |||| ||| Sbjct 59026573 GAAAGATGCACATATTTACCTAAATCACGTTGAGCTGCT 59026611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/279 (67%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 6542 AGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCA 6601 ||| |||| | ||| || ||||| ||||| ||||| ||| ||| || | | || Sbjct 59026611 AGCAGCTCAACGTGATTTAGGTAAATATGTGCATCTTTCAAAGTACCTACAAAGTTACCT 59026552 Query 6602 GGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGC----GTAACTAGCAAT 6657 || || || || || ||| ||||||| | ||||| || ||| || | ||| Sbjct 59026551 GGCTTCAGGCCTGTGATGTGTGCGGTCATGTAGGCGAGCAAGGCCTGTGTAGCTGGTAAT 59026492 Query 6658 GTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTC 6717 ||||| ||||| || | || |||||| || | || || | ||||||||||||||| Sbjct 59026491 GTTGAGGGGCACACCCAGGCCTATGTCTTGTGACCTGTGGTACAACTGGCAGGACAGCTC 59026432 Query 6718 CCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAG 6777 |||| | ||||| ||||| ||| ||||| || || ||| | ||||| || Sbjct 59026431 ATCATT-----CATAGAACTGGCAAAGGTCATGGCAGGGACATAGGGCCTTAAGAGGAAG 59026377 Query 6778 ATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTC 6816 |||||| || ||||| | |||| | | | ||||| || Sbjct 59026376 ATCCTTTGGATTCCAACCACACAGGATGGTTCTTCTTTC 59026338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257900566160