Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq34 138 3e-27 seq19 132 1e-25 seq33 125 2e-23 seq1 114 3e-20 seq14 113 1e-19 seq36 100 7e-16 seq803 95.1 3e-14 seq25 95.1 3e-14 seq39 91.5 4e-13 seq37 87.8 4e-12 >seq34 Length=88915096 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||||||||| || ||||| |||| |||||||| | | ||| | |||||||| ||| Sbjct 47887893 AGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGC 47887834 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || || ||||| || | || ||||| || || || || || || || |||||| Sbjct 47887833 TGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATC 47887774 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || |||||| |||||||||||| || ||||| || | ||||| |||||||| Sbjct 47887773 TTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCG 47887714 Query 225688 GTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||| ||||| | ||| | |||||||| Sbjct 47887713 GTCAGGGTTTTCACGAAGATCTGCATTTT 47887685 >seq19 Length=38964370 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| |||| || || | ||||||| Sbjct 5007387 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007328 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5007327 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007268 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 5007267 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 5007208 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || |||||||| || || | ||| | |||||| Sbjct 5007207 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq33 Length=88276357 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || || || |||| ||||| |||| || || | ||||||| Sbjct 13710990 AGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCT 13710931 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || | || ||||| | | || ||||| || || || ||||||||||| Sbjct 13710930 TCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 13710871 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||||||||||| || ||||| || | || || ||| Sbjct 13710870 TGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTAATGGTC 13710811 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 13710810 TTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 Score = 113 bits (124), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| ||||||||||| || |||| ||||| |||| | || | |||||| Sbjct 13711219 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGTAGGGTGCGCCCATC 13711160 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| | | || ||||| || || || || || || || Sbjct 13711159 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGGATGCCCTCTTTTTC 13711101 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| || ||| ||||||||||| || ||||| || | ||||| || Sbjct 13711100 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 13711041 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || ||||| || || | || | |||||| Sbjct 13711040 CTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq1 Length=122647182 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| |||||||| || || |||| ||||| |||| || || | ||||| Sbjct 14843732 CAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 14843791 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| | | || ||||| || || || || || || || Sbjct 14843792 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTC 14843851 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| || ||| ||||||||||| || ||||| || | ||||| || Sbjct 14843852 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 14843911 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || || | ||| | ||||| Sbjct 14843912 CTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 225512 GGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCT 225571 ||||||| | ||||| |||| |||||||| | | || | |||||||| |||| || Sbjct 93586472 GGAGAGTTAACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTTCT 93586531 Query 225572 TCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTT 225631 | || || ||||| || | || ||||| || || || ||| | || ||||||||||| Sbjct 93586532 TGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGG 93586591 Query 225632 GCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 ||||||| |||| ||||||| || || || || | ||||| || |||| | || Sbjct 93586592 TCTTCACATTTTCGTTGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTATTGCAGGCCA 93586651 Query 225692 AAGTTTTTATGAACACTTGCAT 225713 || || ||||| | ||||| Sbjct 93586652 GGGTCTTCATGAATATCTGCAT 93586673 Score = 93.3 bits (102), Expect = 1e-13 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||| || ||||||||||| ||||| | ||||| || | | || Sbjct 30551879 ACGAAGTCTCAACACACCATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACTGAGC 30551938 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| || ||||| ||||| ||| |||| || || | || |||| || Sbjct 30551939 ACACCCATCTTCCAGTTGCTTGCCAGCAAAGTCCAGTCTCTGCTGATGAGGAAGAATTCC 30551998 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||| || || ||||| ||| ||| ||| | || ||||||| || || | Sbjct 30551999 TTTCTTATC-TGAATCTTGGCCTTTACATTTTCTACTGTATCTGAGGGCTCAGTCTCAAG 30552057 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| |||| | ||||| ||||| | ||||| || Sbjct 30552058 AGTGATAGTCTT-CCCGCAAGGGTTTTCATGAAAATCTGCATCTT 30552101 >seq14 Length=50855280 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||| |||||| || ||||| |||| |||| ||| | | ||| |||||| Sbjct 29349322 AGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCATCT 29349263 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 29349262 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 29349203 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||||||| || ||||| || | |||| ||| Sbjct 29349202 TGGATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCCACCTCCAGGATGATGGTC 29349143 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| |||| || || | ||| | ||||| Sbjct 29349142 TTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 >seq36 Length=80974255 Score = 100 bits (110), Expect = 7e-16 Identities = 130/176 (74%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| ||||| || | |||||| || | || ||||| |||||||||||||| || || Sbjct 43111113 GTGGACTCTTTCTG-ATATTGTAGTCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCC 43111171 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || || || || || || ||||| || || || || || ||||||||||| ||| || || Sbjct 43111172 GCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGAT-TTTGGCTTT 43111230 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 ||| ||| ||||||| || || || || | ||||| || |||||| ||| Sbjct 43111231 GACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGCCCATCA 43111286 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| || |||||||||||||||||||||| Sbjct 45124494 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCCATGGGAGAATATTTTAGAGATAATG 45124553 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 | ||||||||||| |||||||| ||||| ||| ||||| Sbjct 45124554 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACA 45124593 Score = 93.3 bits (102), Expect = 1e-13 Identities = 97/126 (77%), Gaps = 5/126 (4%) Strand=Plus/Minus Query 4453 TTAATCAAAAATATTGTGAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATA 4512 ||||||| ||| || |||| || |||||||| || || || |||||||| || || Sbjct 45124947 TTAATCATAAA-AT----AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATG 45124893 Query 4513 TAAGCAGAAACATCACCTGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCA 4572 |||||||| |||||||| ||||| ||||| | || ||||| || || | || |||||| Sbjct 45124892 TAAGCAGACACATCACCAGCTTGCGTTTCTATGACTGGTAAAGCAGTCAAGGAACCACCA 45124833 Query 4573 CCAAAA 4578 |||||| Sbjct 45124832 CCAAAA 45124827 >seq803 Length=16709 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || ||||| | || || ||||| || || || || || ||| | || || Sbjct 5502 CAAATTTATAATGTTATCGTAACCGCCCATGCTTTCGTAATAATCTTTTTTATAGTCATA 5561 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || ||||||||| | || || ||||| ||||||||||| || Sbjct 5562 CCCATTATAATTGGGGGCTTTGGAAATTGACTAGTACCATTAATAATTGGTGCTCCGGAC 5621 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||||| ||||| | | || || || || || ||| | || || || || || ||||| Sbjct 5622 ATGGCATTTCCCCGAATAAATAACATGAGCTTCTGACTTCTTCCCCCATCTTTCCTTCTA 5681 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || || || |||||||||| |||||||| ||||||||||||||||| || | Sbjct 6074 TTCGGGGTGCCCGAAGAATCAGAATAGGTGTTGATATAGGATAGGATCGCCTCCTCCAGC 6015 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||||| || || | || |||| ||||| || ||||||| Sbjct 6014 AGGATCGAAGAATGTTGTGTTAAGATTTCGGTCTGTTAAAA 5974 >seq25 Length=39895028 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| ||| |||||||||||||||||||||| Sbjct 7459133 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGAGAATATTTTAGAGATAATG 7459074 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 | | ||||||||| |||||||| ||||| ||| ||||| Sbjct 7459073 GCACACATGCTTTGATCATCTATGATGACTTATCCAAACA 7459034 Score = 86.0 bits (94), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || |||||||| || || || |||||||| || | |||||||| |||||||| Sbjct 7458802 GAAAATCTGTCCATCAGTRATGGAAATGACATTTGTTGGAACGTAAGCAGACACATCACC 7458861 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| |||| | || ||||| || || | || |||||||||||| Sbjct 7458862 AGCTTGCATTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 7458910 >seq39 Length=123855249 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||||||| || ||||| | ||||| || | |||||| Sbjct 84732079 ACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGT 84732020 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || || ||||| ||||| || || |||| || || || || || || || Sbjct 84732019 ACGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCC 84731960 Query 225612 TTCCTTGTCTTGGATCTT 225629 |||||| || | ||||| Sbjct 84731959 TTCCTTATCCAGAATCTT 84731942 >seq37 Length=74325445 Score = 87.8 bits (96), Expect = 4e-12 Identities = 120/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 ||||| || ||| | || || ||||| ||||| || ||||||||| | ||||| | || Sbjct 57663060 TACAATGTAATTGTAACTGCCCATGCATTTGTAATAATTTTCTTTATAGTTAT--CAGTC 57663003 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 || || || || || ||||| |||| || || |||| ||||||||||| || || || Sbjct 57663002 ATAATTGGTGGCTTTGGAAACTGATGAGTACCACTAATAATTGGTGCTCCAGACATAGCA 57662943 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 || || | || || ||||| |||||| | || || | ||||| Sbjct 57662942 TTCCCTCAAATAAATAACATAAGCTTTTGACTTCTTCCCCTATCCTT 57662896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192518930717282