Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq33 140 7e-28 seq19 131 4e-25 seq1 123 6e-23 seq36 111 4e-19 seq34 109 1e-18 seq35 105 2e-17 seq14 95.1 3e-14 seq39 84.2 5e-11 >seq33 Length=88276357 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||||| || || ||||| ||||| || ||||||||||| |||| | || Sbjct 13711000 CCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 13710941 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||| || ||| | ||| ||||| | |||||||||||| | | ||| || Sbjct 13710940 GCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 13710881 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| || || || ||| |||||| |||| | | |||| ||| || || || Sbjct 13710880 TTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAG 13710821 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || || || | ||||||||||||| |||||| Sbjct 13710820 AGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 Score = 125 bits (138), Expect = 2e-23 Identities = 159/216 (74%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| || || || ||||||||||| |||| || || | ||||||| Sbjct 13711218 AGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGTAGGGTGCGCCCATCT 13711159 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| ||||| | |||||||||||| | | ||| || || |||||| Sbjct 13711158 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAG-GGGGATGCCCTCTTTTTCT 13711100 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||||| |||| | | |||| ||| ||| || || ||||| || Sbjct 13711099 TGGATCTTCCCTTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATG 13711043 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || | |||||||| |||| ||||||| Sbjct 13711042 GTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 >seq19 Length=38964370 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151885 TGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTC 151944 |||| | ||||| || || ||||| ||||| || ||||||||||| |||| | || | Sbjct 5007395 TGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGC 5007336 Query 151945 TCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||||||| || ||| ||||| ||||| | |||||||||||| | | ||| || | Sbjct 5007335 GCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCT 5007276 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAA 152061 |||| || || || || ||||| |||| | | |||| ||| ||| || || | Sbjct 5007275 CCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCA 5007219 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || || || ||||| | ||||||||||||| ||||||| Sbjct 5007218 GAGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007175 >seq1 Length=122647182 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 14843733 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 14843792 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| ||||| | |||||||||||| | | ||| || || |||||| Sbjct 14843793 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCT 14843852 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||||| |||| | | |||| ||| ||| || || || || || Sbjct 14843853 TGGATCTTCCCTTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 14843909 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||||||||||||| |||||| Sbjct 14843910 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14843944 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 ||| | ||||| ||||||| |||||||||||||| | | || | |||||||| || Sbjct 93586468 AGACGGAGAGTTAACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGC 93586527 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 | || || || ||||| |||||||||||||| | | ||| ||| | || ||||| || Sbjct 93586528 TTCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATC 93586587 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||| | || | |||| ||| ||| || || || || || || ||| Sbjct 93586588 TTGGTCTTCACATTTTCGTTGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTATTG 93586644 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | | || ||||||| ||| | |||||| Sbjct 93586645 CAGGCCAGGGTCTTCATGAATATCTGCAT 93586673 >seq36 Length=80974255 Score = 111 bits (122), Expect = 4e-19 Identities = 146/200 (73%), Gaps = 7/200 (4%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || |||||||| || || ||||| || | | ||||| ||||||||||| ||| || Sbjct 43111113 GTGGACTCTTTCTG-ATATTGTAGTCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCC 43111171 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || || | ||||||||| | | ||| || || || ||||| ||||| |||| Sbjct 43111172 GCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGATTTTGGCTTTG 43111231 Query 152028 ACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 ||| | || | |||| ||| ||| || ||||| || |||||||||||| | || Sbjct 43111232 ACATTTTCAGTGGTGTC---ACTGGGCTCGACCTCAAGGGTGATAGTTTTGCCCATCAGG 43111288 Query 152085 GTCTTCACGAAGACCTGCAT 152104 |||||||| |||| |||||| Sbjct 43111289 GTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 109 bits (120), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || || ||||| |||||||| |||||||||||||| | | ||| | |||||||| || Sbjct 47887893 AGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGC 47887834 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || || ||||| |||||||||||||| | | ||| || || || || || || Sbjct 47887833 TGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATC 47887774 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTG 152075 || || || | || | | |||| ||| ||| || || || || || || ||| Sbjct 47887773 TTGGCCTTCACGTTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTG 47887717 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || |||||||||| ||||||||| Sbjct 47887716 CCGGTCAGGGTTTTCACGAAGATCTGCATTTT 47887685 >seq35 Length=77559626 Score = 105 bits (116), Expect = 2e-17 Identities = 158/222 (71%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| | ||||| |||||||| |||||||||||||| | | ||| | |||||| Sbjct 46120169 AGGACAAGGTAGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCT 46120228 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || | ||| |||||||||||||| | | | | || || || || Sbjct 46120229 TCCAGCTGCTTACCTGCAACGATGAGCCTCTGCTGGTCAG-GGGGGTGCCCTCTTTATCC 46120287 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| | || | | |||| ||| ||| || || || ||||| Sbjct 46120288 TGGATCTTGGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTAATG 46120344 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 || |||| || || ||||||| ||||| |||||| | |||| Sbjct 46120345 GTCTTGCAGGTCAGGGTCTTCAGGAAGATCTGCATATAACCC 46120386 >seq14 Length=50855280 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || | ||||| |||||||| |||||||||| ||| | | ||| Sbjct 29349332 CCTCAGACGGAGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGT 29349273 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 |||||||| || || || || ||||| |||||||||||||| | | ||| || Sbjct 29349272 GTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 29349213 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 || || || || || || || ||| | || | | |||| ||| || || || Sbjct 29349212 CTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCCACCTCCAG 29349153 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || |||| || || ||||||||||||| |||||| Sbjct 29349152 GATGATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 >seq39 Length=123855249 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | ||||||||| |||| ||||| ||||| |||||||| || | ||||| | Sbjct 84732075 AGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACGG 84732016 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || || || || || |||||||| || | | |||||||||| Sbjct 84732015 CCATCCTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCCTTCC 84731956 Query 152007 TTTTCTTGAATTTT 152020 || || |||| || Sbjct 84731955 TTATCCAGAATCTT 84731942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808928986813