Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq19 179 8e-40 seq33 152 1e-31 seq1 147 5e-30 seq36 145 2e-29 seq34 134 3e-26 seq35 98.7 2e-15 seq7 98.7 2e-15 seq39 95.1 3e-14 seq32 89.7 1e-12 seq29 89.7 1e-12 >seq19 Length=38964370 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 |||||||| ||||| || | ||| || || |||||||||||||| | || ||||| Sbjct 5007393 AGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 5007334 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || || ||||| |||||||||||||| | || |||||| || || |||||| Sbjct 5007333 CCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 5007274 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 ||||| |||||||| || || ||| | ||||| ||||| | || || || |||||| Sbjct 5007273 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTG 5007214 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || |||||||||||||| ||||| ||||| ||||||||| || Sbjct 5007213 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATTGTC 5007172 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 4998599 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 4998657 >seq33 Length=88276357 Score = 152 bits (168), Expect = 1e-31 Identities = 172/229 (75%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | || ||| || |||| || | ||| ||| || |||||||||||||| | Sbjct 13711234 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGG 13711175 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || ||||| |||||||||||||| | || |||||| || Sbjct 13711174 TAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 13711115 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 | | ||||| || ||||||||||| |||| || | ||||| ||||| | || || Sbjct 13711114 A-TGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 13711056 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || |||||||| |||||||| ||||| ||||| || || ||||||||| Sbjct 13711055 CTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711007 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 |||||||| ||||| || | || || || |||||||||||||| | || |||| Sbjct 13710996 AGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCAC 13710937 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || || ||||| | |||||||||||| | || |||||| || || || ||| Sbjct 13710936 CCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCC 13710877 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 ||||| ||||||||||| || || | ||||| ||||| | || || || ||||| Sbjct 13710876 TTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTA 13710817 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||| ||||| |||||||| Sbjct 13710816 ATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13710779 >seq1 Length=122647182 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | || ||||| ||||| || || ||||| ||||||||| Sbjct 14843754 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAG 14843813 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || |||||| || || ||||| || ||||||||||| |||| || | Sbjct 14843814 ATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTC 14843873 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| | || || || || ||||| |||||||| ||||| ||||| ||| Sbjct 14843874 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACG 14843933 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 14843934 AAGATCTGCAT 14843944 Score = 96.9 bits (106), Expect = 7e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| ||| ||||||||||| || || | || || |||||| Sbjct 93586483 TCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTTCTTGCCTGCAAAG 93586542 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || |||||| || || || | || ||||||||||| | || || | Sbjct 93586543 ATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGGTCTTCACATTT 93586602 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||| | ||||| | || || || || ||||| || || | | || ||||| | | Sbjct 93586603 TCGTTGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTATTGCAGGCCAGGGTCTTCATG 93586662 Query 283089 AATATCTGCAT 283099 ||||||||||| Sbjct 93586663 AATATCTGCAT 93586673 >seq36 Length=80974255 Score = 145 bits (160), Expect = 2e-29 Identities = 169/227 (74%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||||||||| |||| || || ||| ||||| || || |||||||| | Sbjct 43111083 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGAC 43111141 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| ||||| ||||| || ||||| |||| ||| || |||||| || Sbjct 43111142 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111201 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||||||||| || ||||| || | || | ||||| | ||||| Sbjct 43111202 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111261 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || ||| ||| ||||| || || |||||||| Sbjct 43111262 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 43111308 >seq34 Length=88915096 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| ||| ||||||||||| || || || || || |||||| Sbjct 47887878 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 47887819 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || |||||| || || ||||| || || |||||||| || || ||| | Sbjct 47887818 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTT 47887759 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| | || || || || ||||| ||||| || |||| || || ||| Sbjct 47887758 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACG 47887699 Query 283089 AATATCTGCATTTT 283102 || ||||||||||| Sbjct 47887698 AAGATCTGCATTTT 47887685 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 33028622 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 33028564 >seq35 Length=77559626 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/226 (70%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 282874 CACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAA 282933 |||| | ||||||||| || || | | || ||||| ||||||||||| |||| || Sbjct 46120155 CACCCCTCAGGCGAAGGACAAGGTAGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAA 46120214 Query 282934 GCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAA 282993 | |||| |||||| || || || || || |||| ||| | | || |||||| || Sbjct 46120215 GAGTGCAGCCATCTTCCAGCTGCTTACCTGCAACGATGAGCCTCTGCTGGTCA-GGGGGG 46120273 Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTT 283053 | ||||| || || |||||||| || || || | || || ||||| | || || | Sbjct 46120274 TGCCCTCTTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCT 46120333 Query 283054 CGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || ||||| | |||| ||||| | ||| |||||||| Sbjct 46120334 CCAGGGTAATGGTCTTGCAGGTCAGGGTCTTCAGGAAGATCTGCAT 46120379 >seq7 Length=64190696 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 37922631 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 37922689 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 35830840 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 35830898 >seq39 Length=123855249 Score = 95.1 bits (104), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||||||||| |||| |||| ||| | ||| | ||||| | | Sbjct 105462191 CCACCCCACAGGCGAAGCACCAA-------GTGCACTCTGTCTGGCTATTGTAACCCGAG 105462243 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAAC-GTTGTTGGTCACCCGG 282991 || || |||| ||||| || ||||| || |||| |||| || | || |||||| || Sbjct 105462244 AGAGTATGGCCGTCCTCCAGCTGTTTGCCTTCAAAAATCACACTGCTGCTGGTCAGGTGG 105462303 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || |||||| |||| || ||| | || | | | |||| | | ||||| Sbjct 105462304 GATGCC-TCTTTGTCTGGGATTTTGGCTGTGACATTCTTAGTGATGTCATAGGGCTCGAC 105462362 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 | ||| ||||||||||| ||| ||| |||||| || || |||||||||| Sbjct 105462363 CTTGAGGGTGATCGTCTTGCCCATCAGAGTCTTCACAAAGATCTGCATTT 105462412 >seq32 Length=23913985 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 21070285 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 21070227 >seq29 Length=26524611 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 24816504 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 24816562 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 24874417 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 24874359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728430689162